Details from NCBI annotation

Gene Symbol Pax6
Gene Name paired box 6, transcript variant X5
Entrez Gene ID 101712507

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PAX6 ENSCPOG00000007245 (Guinea pig)

Gene Details

paired box 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006528, Guinea pig)

Protein Percentage 98.17%
CDS Percentage 93.35%
Ka/Ks Ratio 0.02884 (Ka = 0.01, Ks = 0.3458)

PAX6 ENSG00000007372 (Human)

Gene Details

paired box 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000404100, Human)

Protein Percentage 99.54%
CDS Percentage 89.98%
Ka/Ks Ratio 0.00375 (Ka = 0.0021, Ks = 0.5553)

Pax6 ENSMUSG00000027168 (Mouse)

Gene Details

paired box gene 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000087870, Mouse)

Protein Percentage 99.31%
CDS Percentage 88.99%
Ka/Ks Ratio 0.00469 (Ka = 0.0031, Ks = 0.6587)

Pax6 ENSRNOG00000004410 (Rat)

Gene Details

paired box 6 (Pax6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006302, Rat)

Protein Percentage 99.08%
CDS Percentage 89.3%
Ka/Ks Ratio 0.00798 (Ka = 0.0051, Ks = 0.6386)

Genome Location

Sequence Coding sequence

Length: 1311 bp    Location: 20554612..20536233   Strand: -
>XM_004851606.1
ATGCAGAACAGTCACAGTGGTGTGAATCAGCTCGGAGGTGTCTTTGTCAACGGGCGGCCACTGCCGGACTCCACCCGGCAGAAGATCGTAGAGCTAGCGCACAGCGGGGCCCGGCCTTGCGACATCTCCCGAATTCTGCAGACCCATGCAGATGCAAAAGTCCAAGTGCTGGACAATCAAAACGTGTCCAACGGCTGTGTGAGTAAAATTCTGGGCAGGTATTACGAGACCGGCTCCATCCGACCCAGGGCCATCGGGGGCAGTAAACCCAGAGTGGCAACTCCGGAAGTTGTGAGCAAAATTGCCCAGTACAAGCGGGAGTGCCCGTCCATCTTTGCCTGGGAAATCCGAGACAGATTGCTGTCTGAGGGGGTCTGCACCAACGACAACATACCAAGTGTGTCATCAATAAACAGAGTTCTTCGCAACCTGGCTAGCGAAAAGCAACAGATGGGCGCAGACGGCATGTATGATAAACTAAGGATGCTGAACGGGCAGACCGGAAGCTGGGGCACCCGCCCTGGGTGGTATCCGGGCACTTCCGTGCCAGGCCAGCCCACACAAGATGGGTGCCAGCAGCAGGAAGGAGCGGGGGAGAACACCAACTCCATCAGCTCCAACGGGGAGGACTCGGACGAGGCGCAGATGCGGCTGCAGCTGAAGCGGAAGCTGCAGCGGAACAGGACCTCCTTCACTCAGGAGCAGATCGAGGCCCTGGAGAAAGAGTTTGAGAGAACCCACTATCCAGATGTGTTCGCCCGGGAAAGACTAGCAGCCAAGATAGACCTACCTGAAGCGAGAATACAGGTCTGGTTTTCCAACAGAAGGGCCAAGTGGAGACGAGAGGAGAAGCTGAGGAACCAGCGGAGACAGGCCAGCAACACCCCCAGCCACATCCCCATCAGCAGCAGCTTCAGCACGAGCGTGTACCAGCCCATCCCGCAGCCCACCACCCCGGTGTCCTCCTTCACGTCTGGCTCCATGCTGGGCCGGACAGACACGGCCCTCACCAACACATACAGCGCGCTGCCACCCATGCCCAGCTTCACCATGGCCAACAGCCTGCCTATGCAGCCCCCTGTCCCCAGCCAGACCTCCTCGTACTCCTGCATGCTGCCCACCAGCCCATCGGTGAACGGGCGGAGTTATGACACCTACACGCCCCCACACATGCAGACCCACATGAATAGCCAGCCTATGGGCACCTCGGGCACCACGTCTACAGGCCTCATTTCTCCCGGCGTGTCCGTTCCAGTCCAGGTTCCTGGAAGTGAACCTGATATGTCTCAATATTGGCCAAGATTACAGTAA

Related Sequences

XP_004851663.1 Protein

Pax6 PREDICTED: paired box protein Pax-6 isoform X5 [Heterocephalus glaber]

Length: 436 aa      View alignments
>XP_004851663.1
MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGAGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTMANSLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ