Details from NCBI annotation

Gene Symbol Lin7c
Gene Name lin-7 homolog C (C. elegans), transcript variant X1
Entrez Gene ID 101703493

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LIN7C ENSCPOG00000015497 (Guinea pig)

Gene Details

lin-7 homolog C (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013975, Guinea pig)

Protein Percentage 99.49%
CDS Percentage 90.19%
Ka/Ks Ratio 0.00193 (Ka = 0.0021, Ks = 1.0763)

LIN7C ENSG00000148943 (Human)

Gene Details

lin-7 homolog C (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSP00000278193, Human)

Protein Percentage 99.49%
CDS Percentage 79.53%
Ka/Ks Ratio 0.001 (Ka = 0.0029, Ks = 2.9457)

Lin7c ENSMUSG00000027162 (Mouse)

Gene Details

lin-7 homolog C (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028583, Mouse)

Protein Percentage 99.49%
CDS Percentage 82.06%
Ka/Ks Ratio 0.00132 (Ka = 0.0024, Ks = 1.8146)

Lin7c ENSRNOG00000045698 (Rat)

Gene Details

lin-7 homolog C (C. elegans) (Lin7c), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065941, Rat)

Protein Percentage 99.49%
CDS Percentage 82.91%
Ka/Ks Ratio 0.00134 (Ka = 0.0024, Ks = 1.8019)

Genome Location

Sequence Coding sequence

Length: 594 bp    Location: 17167073..17162041   Strand: -
>XM_004851578.1
ATGGCGGCGCTGGGAGAACCTGTACGGCTGGAGAGGGATATCTGCAGAGCGATCGAGCTGCTGGAGAAGCTGCAGCGGAGTGGGGAGGTGCCACCACAGAAGCTGCAGGCGCTGCAGAGAGTCCTCCAGAGCGAGTTCTGCACGGCCGTGCGGGAGGTGTACGAGCACGTCTATGAGACAGTGGACATCAGCAGCAGTCCTGAAGTGAGGGCCAATGCAACCGCAAAGGCCACTGTGGCTGCGTTTGCAGCCAGCGAGGGACATTCTCATCCCCGCGTGGTGGAGCTGCCGAAGACGGAAGAGGGCCTCGGCTTCAATATCATGGGGGGCAAGGAGCAGAACTCTCCCATCTACATATCTCGGATAATTCCCGGCGGGATTGCAGACAGACACGGGGGCCTCAAGCGCGGAGACCAGCTCCTTTCTGTGAATGGAGTGAGCGTGGAGGGTGAGCACCATGAGAAGGCCGTGGAGCTGCTGAAGGCCGCGCAGGGCAAGGTGAAGCTGGTGGTGCGCTACACGCCCAAGGTGCTGGAGGAGATGGAGTCACGCTTCGAGAAGATGCGCTCGGCCAAGCGCAGGCAGCAGACCTAG

Related Sequences

XP_004851635.1 Protein

Lin7c PREDICTED: protein lin-7 homolog C isoform X1 [Heterocephalus glaber]

Length: 197 aa      View alignments
>XP_004851635.1
MAALGEPVRLERDICRAIELLEKLQRSGEVPPQKLQALQRVLQSEFCTAVREVYEHVYETVDISSSPEVRANATAKATVAAFAASEGHSHPRVVELPKTEEGLGFNIMGGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAQGKVKLVVRYTPKVLEEMESRFEKMRSAKRRQQT