Details from NCBI annotation

Gene Symbol Tph1
Gene Name tryptophan hydroxylase 1
Entrez Gene ID 101710219

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TPH1 ENSCPOG00000000911 (Guinea pig)

Gene Details

tryptophan hydroxylase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000821, Guinea pig)

Protein Percentage 92.78%
CDS Percentage 92.7%
Ka/Ks Ratio 0.18565 (Ka = 0.0373, Ks = 0.2011)

TPH1 ENSG00000129167 (Human)

Gene Details

tryptophan hydroxylase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000250018, Human)

Protein Percentage 93.92%
CDS Percentage 91.67%
Ka/Ks Ratio 0.10393 (Ka = 0.0306, Ks = 0.2943)

Tph1 ENSMUSG00000040046 (Mouse)

Gene Details

tryptophan hydroxylase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000037752, Mouse)

Protein Percentage 89.19%
CDS Percentage 85.96%
Ka/Ks Ratio 0.10748 (Ka = 0.0573, Ks = 0.5328)

Tph1 ENSRNOG00000011672 (Rat)

Gene Details

tryptophan hydroxylase 1 (Tph1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000052959, Rat)

Protein Percentage 90.09%
CDS Percentage 86.34%
Ka/Ks Ratio 0.10402 (Ka = 0.0536, Ks = 0.5151)

Genome Location

Sequence Coding sequence

Length: 1335 bp    Location: 9651680..9633200   Strand: -
>XM_004851516.1
ATGATCGAAGACAATAAGGAGAACAAAGACTATTCCTTGGAAAGAGGGAGAGCAACTCTCATTTTTTCCTTGAAGAATGAAGTTGGAGGACTTCTACAGGCACTGAAAATCTTCCAGGAGAAGCATGTGAACCTGTTACATATCGAGTCCCGAAAATCGAAGAGAAGAAATTCAGAATTTGAGATTTTTGTTGACTGTGATATCGGTAGAGAACAACTGAATGATATTTTCCATCTGCTGAAGTCTCATACTAATGTTCTCTCTGTGAACTCACCAGATAATTTTACGGTGAAGGAAGATGGTATGGAAACTGTTCCTTGGTTTCCAAAGAAGATCTCTGACTTGGACTTTTGTGCTACCAGAGTTCTGATGTATGGATCTGACCTTGATGCCAATCATCCTGGCTTCAAAGACAATGTGTACCGTAAAAGACGAAAGTATTTTTCAGAGTTGGCTATGAATTATAAACACGGAGACCCCATTCCCAAGGTTGAATTCACCAAAGAAGAGATTAATACCTGGGGAACTGTTTTCCGAGAGCTCTACAAACTCTACCCAACCCATGCCTGCCGAGAGTACCTCAAAAACTTACCTTTGCTTTCTAAATATTGTGGCTATCAGGAAGATAATATTCCACAACTGGAGGATGTCTCAAACTTTTTAAAAGAGCGCACAGGGTTTTCCATCCGTCCTGTGGCTGGCTACTTATCACCAAGAGATTTCCTATCAGGTTTAGCCTTTCGAGTTTTTCACTGCACTCAGTATGTGAGACACAGTTCAGACCCTCTCTATACCCCAGAGCCAGATACCTGCCATGAACTCTTAGGTCATGTTCCACTCTTGGCTGAACCTAGTTTTGCTCAATTCTCCCAAGAAATTGGTCTGGCATCACTTGGAGCTTCAGAGGAGGCTGTTCAGAAGCTGGCAACGTGCTACTTTTTCACTGTGGAGTTTGGTTTGTGTAAGCAAGATGGGCAGCTAAGAGTCTTTGGTGCTGGCTTGCTTTCTTCTATCAGTGAGCTCAAACATGCACTTTCTGGACATGCCAAAGTAAAGCCCTTTGATCCCAAGATTACTTGCAAACAGGAATGTCTTATCACAACCTTTCAAGATGTCTATTTTGTATCTGAAAGCTTTGAAGATGCAAAGGAGAAAATGAGAGAATTTGCCAAAACAACTAAACGTCCATTTGGGGTGAAGTACAATCCATATACTCAGAGTATTCAGATCCTGAAAGACACCAAGAGCATAACCAGTGCCATGAATGAGCTGCGGCATGATCTTGATGTCGTCAGTGATGCCCTCACTAAGGTCAGCAGGCAGCTGAGTATGTGA

Related Sequences

XP_004851573.1 Protein

Tph1 PREDICTED: tryptophan 5-hydroxylase 1 [Heterocephalus glaber]

Length: 444 aa      View alignments
>XP_004851573.1
MIEDNKENKDYSLERGRATLIFSLKNEVGGLLQALKIFQEKHVNLLHIESRKSKRRNSEFEIFVDCDIGREQLNDIFHLLKSHTNVLSVNSPDNFTVKEDGMETVPWFPKKISDLDFCATRVLMYGSDLDANHPGFKDNVYRKRRKYFSELAMNYKHGDPIPKVEFTKEEINTWGTVFRELYKLYPTHACREYLKNLPLLSKYCGYQEDNIPQLEDVSNFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPLYTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASEEAVQKLATCYFFTVEFGLCKQDGQLRVFGAGLLSSISELKHALSGHAKVKPFDPKITCKQECLITTFQDVYFVSESFEDAKEKMREFAKTTKRPFGVKYNPYTQSIQILKDTKSITSAMNELRHDLDVVSDALTKVSRQLSM