Sequence details NCBI ID: XM_004851475.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Calcb
Gene Name calcitonin-related polypeptide beta, transcript variant X2
Entrez Gene ID 101725809

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CALCB ENSCPOG00000009939 (Guinea pig)

Gene Details

calcitonin-related polypeptide beta

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008918, Guinea pig)

Protein Percentage 85.83%
CDS Percentage 90.03%
Ka/Ks Ratio 0.28219 (Ka = 0.0716, Ks = 0.2539)

CALCB ENSG00000175868 (Human)

Gene Details

calcitonin-related polypeptide beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000433490, Human)

Protein Percentage 81.1%
CDS Percentage 87.4%
Ka/Ks Ratio 0.32607 (Ka = 0.1034, Ks = 0.3172)

Calcb ENSMUSG00000030666 (Mouse)

Gene Details

calcitonin-related polypeptide, beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032902, Mouse)

Protein Percentage 73.23%
CDS Percentage 81.36%
Ka/Ks Ratio 0.25187 (Ka = 0.1468, Ks = 0.5829)

Calcb ENSRNOG00000011074 (Rat)

Gene Details

calcitonin-related polypeptide, beta (Calcb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014764, Rat)

Protein Percentage 72.22%
CDS Percentage 83.07%
Ka/Ks Ratio 0.37677 (Ka = 0.153, Ks = 0.4062)

Genome Location

Sequence Coding sequence

Length: 384 bp    Location: 6851772..6855951   Strand: +
Raw sequence   
>XM_004851475.1
ATGGGCTTCCGGAAATTCTCCCGCATCCTGGCTTTCAGCATCTTGGTCCTGTGCCAGGCCGGCAGCCTCCGGGCAGCATCTTCCAGGCAGGACTTGGAGAGCAGCCCAGTCCTGGTCGCGCTAGGTGAAGAGGAAGCGCGCCTCCTGCTGGCAGCACTGGTGCAGGACTACCTGCAGATGAAGGCCAGTGAGCTGGAGCAGGAGCAGGAGACAGAGGGCTCCAGTGTCACTGCCCAGAAGAGAGCCTGCAACACCGCCACCTGTGTGACCCAACGGCTGGCAGGCTTGCTGAGCAGATCAGGGGGTGTGGTGAAGGACAACTTCGTGCCCACCAATGTAGGCTCCAAAGCCTTTGGCCGGCGCCGCAGGGACCTTCAGGCCTGA

Related Sequences

XP_004851532.1 Protein

Calcb PREDICTED: calcitonin gene-related peptide 2 isoform X2 [Heterocephalus glaber]

Length: 127 aa      View alignments
>XP_004851532.1
MGFRKFSRILAFSILVLCQAGSLRAASSRQDLESSPVLVALGEEEARLLLAALVQDYLQMKASELEQEQETEGSSVTAQKRACNTATCVTQRLAGLLSRSGGVVKDNFVPTNVGSKAFGRRRRDLQA