Sequence details NCBI ID: XM_004851426.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Galnt18
Gene Name UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18
Entrez Gene ID 101710822

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GALNT18 ENSCPOG00000006859 (Guinea pig)

Gene Details

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006183, Guinea pig)

Protein Percentage 98.68%
CDS Percentage 94.07%
Ka/Ks Ratio 0.01715 (Ka = 0.0057, Ks = 0.3336)

GALNT18 ENSG00000110328 (Human)

Gene Details

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18

External Links

Gene Match (Ensembl Protein ID: ENSP00000227756, Human)

Protein Percentage 98.35%
CDS Percentage 92.31%
Ka/Ks Ratio 0.01572 (Ka = 0.0078, Ks = 0.4941)

Galnt18 ENSMUSG00000038296 (Mouse)

Gene Details

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000043636, Mouse)

Protein Percentage 97.53%
CDS Percentage 90.72%
Ka/Ks Ratio 0.01792 (Ka = 0.0113, Ks = 0.6283)

Galnt18 ENSRNOG00000017021 (Rat)

Gene Details

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18 (Galnt18), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022984, Rat)

Protein Percentage 97.53%
CDS Percentage 90.33%
Ka/Ks Ratio 0.01747 (Ka = 0.0114, Ks = 0.6513)

Genome Location

Sequence Coding sequence

Length: 1824 bp    Location: 3667943..3328377   Strand: -
Raw sequence   
>XM_004851426.1
ATGGTGTGCACCAGGAAGACCAAAACTTTGGTGTCCACTTGCGTGATCCTGAGCGGCATGACCAACATCATATGCCTGCTCTACGTGGGCTGGGTCACCAACTACATCGCCAGCGTGTATGTGCGGGGGCAGGAACCGGCGCCGGACAAGAAGCTGGAGGAAGACAAAGGGGATACTCTGAAGATTATTGAGCGGCTGGACCACCTGGAGAATGTCATCAAGCAGCACATCCAAGAGGCCCCTGCCAAGCCTGAGGAGGCAGAGGCTGAGCCCTTCACAGACTCCTCACTGTTCGCACACTGGGGCCAGGAGCTCAGCCCTGAAGGCCGGCGCGTGGCCCTGAAGCAGTTCCAGTACTACGGCTACAATGCCTACCTCAGCGACCGCCTGCCCCTCAACAGGCCCCTACCGGACCTCAGACCCAGTGGGTGCCGAAACCTGTCGTTCCCCAACAGCTTGCCGGAGGTGAGCATTGTGTTCATTTTTGTCAACGAGGCTCTCTCAGTGCTGCTGCGCTCCATCCACTCCGCCATCGAGCGCACACCCTCACACCTGCTCAAGGAGATCATCCTGGTGGACGACAACAGCAGCAATGAGGAGCTGAAGGAGAAGCTGACGGAGTACGTGGACAAGGTGAACAGCCAGAAGCCAGGCTTCATCAAGGTCGTGCGCCACAACAAGCAGGAAGGCCTCATCCGCTCCAGGGTCAGCGGCTGGCGGGCAGCCACTGCCCCTGTGGTGGCGCTCTTTGATGCCCATGTGGAGTTCAATGTGGGCTGGGCTGAACCAGTACTCACCCGAATAAAGGAGAATCGGAAGCGGATCATCTCACCATCCTTTGATAACATTAAATATGACAACTTTGAGATAGAAGAGTACCCACTGGCTGCCCAGGGCTTTGACTGGGAGCTGTGGTGCCGCTACTTAAATCCTCCCAAGGCCTGGTGGAAGCTGGAGAACTCCACTGCCCCAATCAGGAGCCCCGCCCTCATTGGCTGCTTCATTGTGGACCGCCAGTATTTCCAGGAGATCGGCCTGCTGGACGAAGGCATGGAGGTCTATGGAGGCGAGAATGTCGAGCTCGGGATCAGGGTATGGCAGTGTGGTGGCAGCGTGGAGGTCCTGCCCTGTTCGCGGATCGCCCACATCGAGCGAGCCCACAAGCCCTACACTGAGGACCTCACTGCGCATGTCCGCAGGAATGCCCTCAGGGTGGCTGAAGTCTGGATGGATGAATTTAAAAGTCATGTCTACATGGCCTGGAACATACCCCAAGAGGACTCAGGAATTGACATCGGGGACATCACTGCAAGAAAAGCTCTGAGGAAGCAGCTTCAATGCAAAACCTTCCGATGGTACCTGGTCAGCGTGTATCCAGAGATGAGGATGTATTCTGACATCATTGCCTACGGGGTGCTGCAGAATTCCCTGAAGACAGATTTGTGTCTTGACCAGGGGCCAGACACAGAGAATGTCCCCATCATGTACATCTGCCACGGCATGACGCCCCAGAACGTGTACTATACAAGCAGTCAGCTGATCCACGTGGGTGTCCTGAGCCCCACAGTGGATGACGATGACAATCGGTGCCTGGTGGATGTGAACAGCCGGCCTCGGCTCATCGAATGCAGCTACGCCAAAACCAAGAGGATGAAGCTCCACTGGCAATTCTCTCAGGGAGGCCTCATCCAGAACCGCAAGTCCAAGCGCTGCCTGGAGCTGCAGGAGAACAGCGACACGGAGTTTGGCTTCCAGCTGGTGCTGCAGAAGTGCTCGGGCCAGCACTGGAGCATCACCAACGTCCTGAGGAGCCTGGCCTCCTGA

Related Sequences

XP_004851483.1 Protein

Galnt18 PREDICTED: polypeptide N-acetylgalactosaminyltransferase 18 [Heterocephalus glaber]

Length: 607 aa      View alignments
>XP_004851483.1
MVCTRKTKTLVSTCVILSGMTNIICLLYVGWVTNYIASVYVRGQEPAPDKKLEEDKGDTLKIIERLDHLENVIKQHIQEAPAKPEEAEAEPFTDSSLFAHWGQELSPEGRRVALKQFQYYGYNAYLSDRLPLNRPLPDLRPSGCRNLSFPNSLPEVSIVFIFVNEALSVLLRSIHSAIERTPSHLLKEIILVDDNSSNEELKEKLTEYVDKVNSQKPGFIKVVRHNKQEGLIRSRVSGWRAATAPVVALFDAHVEFNVGWAEPVLTRIKENRKRIISPSFDNIKYDNFEIEEYPLAAQGFDWELWCRYLNPPKAWWKLENSTAPIRSPALIGCFIVDRQYFQEIGLLDEGMEVYGGENVELGIRVWQCGGSVEVLPCSRIAHIERAHKPYTEDLTAHVRRNALRVAEVWMDEFKSHVYMAWNIPQEDSGIDIGDITARKALRKQLQCKTFRWYLVSVYPEMRMYSDIIAYGVLQNSLKTDLCLDQGPDTENVPIMYICHGMTPQNVYYTSSQLIHVGVLSPTVDDDDNRCLVDVNSRPRLIECSYAKTKRMKLHWQFSQGGLIQNRKSKRCLELQENSDTEFGFQLVLQKCSGQHWSITNVLRSLAS