Details from NCBI annotation

Gene Symbol Ctr9
Gene Name Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
Entrez Gene ID 101709165

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CTR9 ENSCPOG00000009018 (Guinea pig)

Gene Details

CTR9, Paf1/RNA polymerase II complex component

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008099, Guinea pig)

Protein Percentage 97.7%
CDS Percentage 93.38%
Ka/Ks Ratio 0.05641 (Ka = 0.0148, Ks = 0.2615)

CTR9 ENSG00000198730 (Human)

Gene Details

CTR9, Paf1/RNA polymerase II complex component

External Links

Gene Match (Ensembl Protein ID: ENSP00000355013, Human)

Protein Percentage 97.35%
CDS Percentage 92.43%
Ka/Ks Ratio 0.03484 (Ka = 0.012, Ks = 0.3445)

Ctr9 ENSMUSG00000005609 (Mouse)

Gene Details

Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000005749, Mouse)

Protein Percentage 97.01%
CDS Percentage 89.62%
Ka/Ks Ratio 0.02726 (Ka = 0.0142, Ks = 0.5202)

Ctr9 ENSRNOG00000017195 (Rat)

Gene Details

CTR9, Paf1/RNA polymerase II complex component (Ctr9), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023741, Rat)

Protein Percentage 97.18%
CDS Percentage 89.54%
Ka/Ks Ratio 0.02522 (Ka = 0.0134, Ks = 0.53)

Genome Location

Sequence Coding sequence

Length: 3540 bp    Location: 2823559..2851742   Strand: +
>XM_004851423.1
ATGTCTCGGGGCTCCATCGAGATTCCCCTCCGGGACACTGACGAGGTCATTGAACTTGACTTCGATCAGTTACCGGAGGGGGATGAAGTTATCAGTATTCTGAAGCAGGAACATACACAACTGCACATATGGATTGCTTTGGCGCTGGAATACTACAAGCAAGGAAAAACAGAAGAGTTTGTAAAGTTGTTGGAAGCGGCACGTATAGATGGCAATTTGGATTACAGAGACCATGAAAAAGACCAGATGACTTGCTTGGATACATTGGCAGCCTATTATGTACAACAGGCTCGGAAAGAAAAGAATAAGGACAATAAGAAGGATCTTATTACACAGGCAACCTTGTTGTATACAATGGCTGATAAAATTATTATGTATGATCAGAACCATTTACTGGGAAGAGCCTGCTTCTGCTTACTTGAAGGTGACAAAATGGATCAAGCTGATGCACAGTTTCATTTTGTACTCAACCAGTCTCCAAATAATATTCCAGCCCTTCTTGGTAAAGCTTGTATTTCATTCAACAAGAAGGATTACCGAGGAGCTCTTGCTTACTATAAAAAAGCATTGCGTACTAACCCAGGATGTCCAGCTGAAGTTCGTCTAGGAATGGGCCATTGCTTTGTGAAACTTAACAAGCTAGAGAAAGCTCGTCTGGCATTCAGCAGAGCCCTGGAACTTAACTCCAAATGTGTAGGAGCATTGGTTGGACTGGCTGTCTTAGAACTCAACAATAAAGAGGCTGATTCCATCAAAAATGGTGTCCAGCTCCTTTCCAGAGCATATACTATTGATCCCAGTAACCCTATGGTATTGAACCACTTGGCAAATCACTTTTTCTTCAAAAAGGACTACAGTAAAGTGCAGCACCTGGCTCTCCACGCCTTCCATAACACCGAAGTGGAGGCTATGCAGGCCGAGAGCTGCTACCAGCTGGCTAGGTCATTCCATGTTCAGGAAGATTATGACCAAGCTTTTCAGTACTACTATCAGGCCACACAGTTTGCCTCATCCTCTTTTGTGCTCCCGTTTTTTGGTTTGGGACAAATGTATATTTATAGAGGTGACAAAGAGAATGCATCTCAGTGCTTTGAAAAAGTTTTGAAAGCTTATCCTAACAATTATGAAACGATGAAAATTCTTGGCTCTCTTTATGCTGCATCAGAAGATCAAGAAAAAAGAGATATTGCCAAGGGCCATTTGAAGAAGGTCACAGAACAGTATCCTGATGATGTTGAGGCTTGGATTGAATTGGCACAAATCTTAGAACAGACTGATATACAGGGTGCCCTTTCAGCCTATGGAACAGCAACACGAATCCTTCAAGAGAAAGTGCAGGCTGATGTCCCCCCTGAGATCCTGAATAATGTTGGTGCCCTCCATTTTAGACTTGGGAACCTAGGAGAGGCGAAGAAATATTTTTTGGCATCATTAGATCGTGCAAAGGCAGAAGCTGAACATGATGAACATTACTATAACGCCATTTCTGTTACTACATCATACAATTTAGCCAGGCTGTATGAGGCAATGTGTGAATTCCATGAAGCAGAAAAACTGTATAAAAACATCTTACGAGAACATCCCAACTATGTTGACTGCTATTTGCGTCTAGGAGCCATGGCCAGAGATAAAGGAAATTTTTATGAGGCTTCAGATTGGTTTAAGGAAGCTCTTCAGATTAATCAGGATCATCCAGATGCTTGGTCTTTGATTGGTAATCTTCATTTGGCAAAACAAGAATGGGGTCCAGGCCAGAAGAAATTTGAGAGGATATTGAAGCAGCCGTCCACACAGAGTGACACTTACTCCATGCTAGCCCTTGGCAATGTGTGGCTCCAAACTTTGCATCAGCCCACTCGAGACCGAGAAAAGGAAAAGCGTCATCAAGATCGTGCTCTGGCCATCTACAAACAAGTTCTCAGAAATGATGCGAAGAATCTGTATGCTGCTAATGGCATAGGAGCTGTTTTGGCCCACAAAGGATATTTCCGTGAAGCTCGTGATGTATTTGCCCAAGTGAGAGAAGCAACAGCAGATATAAGTGATGTGTGGTTGAACTTAGCACACATCTACGTGGAGCAAAAGCAGTATATCAGTGCTGTTCAGATGTATGAAAACTGCCTCAGAAAATTCTATAAGCACCAAAATACTGAAGTTGTGCTCTATTTGGCCCGGGCCCTCTTCAAGTGTGGCAAATTACAGGAATGCAAGCAGACTTTGCTGAAGGCTAGACATGTTGCACCCAGTGATACAGTTCTTATGTTTAATGTGGCCTTGGTCTTGCAAAGATTAGCTACCTCTGTCCTAAAAGATGAGAAAAGTAATCTGAAGGAAGTGCTTAATGCTGTGAAAGAACTGGAGCTTGCACATAGATCCTTCAGCTACTTGAGTAAAGTGGGAGATAAAATGAGATTTGATTTGGCCCTTGCTGCTACAGAAGCCAGGCAATGCTCTGACTTACTGAGCCAGGCCCAGTACCATGTGGCCCGGGCGCGAAAACAGGATGAAGAAGAACGGGAGTTGCGGGCCAAACAAGAGCAAGAAAAGGAGCTATTAAGGCAGAAACTTCTTAAGGAACAGGAAGAGAAACGTCTCAGAGAAAAGGAAGAGCAAAAGAAACTTTTGGAACAGCGAGCCCAGTATGTGGAAAAGACCAAAAACATTCTTATGTTTACTGGAGAGACAGAAGCAACAAAAGAGAAGAAAAGAGGTGGTGGGCGGCGCTCTAAGAAAGGAGGTGAGTTTGATGAATTTGTCAACGATGACACTGATGATGACCTACCGATATCTAAAAAGAAGAAGAGGAGAAAAGGCAGCGGTAGTGAGCCAGAAGGCGAGGATGAGGAGGGTGGTGAGAGAAGGAAGAAGAAGAGGAGAAGACCTCCGAAGGGAGAAGAAGGATCTGATGATGATGAAGCAGAAAATGGCCCCAAATTGAAGAAGCGCCGTCTACCAAGAACAGAGAAGAAAAAGGCTCCCAAGCCTGAACGTCTGCCTCCTTCAATGAAGGGAAAAATAAAATCCAAAGCCATAATATCATCAAGTGATGATTCTTCAGATGAGGATAAACTGAAAATTGCTGATGAAGGACATCCCAGGCACAGCAACAGCAACAGCAACAGCGACTCAGAGGAGGACGAACGGCCCAAGAGACGCTCCTCGTCGGAGAGCGACTCTGATGAGAACCAGAACAGGTCTGGCAGCGAGGCCGGCAGTCCCCTGAGGGCCCGCAGACAGCAGTCCGAGGAGGATTCCGACAGCGACCAGGACCAGCCCTCCCAAAAGAGGAGGACCTCGGGCTCCGAGCAGTCCGACAATGAGTCTGTACAGTCAGGGAGAAGCCCCTCCGCGGCTTCGGAGAACGACTCTCGTCCGGTGTCTCCAAGTGCAGAGTCGGATCGTGAATCGGAGCGAGGCTCTGACAACGAGGGTTCCGGCCAAGGCTCTGGAAATGAGTCGGAACCGGAGGGATCCAACAACGAAGGCTCTGAGCGAGGCTCAGATCGCGGCTCAGATCGTGGCTCAGACGACAGCGACTAG

Related Sequences

XP_004851480.1 Protein

Ctr9 PREDICTED: RNA polymerase-associated protein CTR9 homolog [Heterocephalus glaber]

Length: 1179 aa      View alignments
>XP_004851480.1
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRSFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKEKKRGGGRRSKKGGEFDEFVNDDTDDDLPISKKKKRRKGSGSEPEGEDEEGGERRKKKRRRPPKGEEGSDDDEAENGPKLKKRRLPRTEKKKAPKPERLPPSMKGKIKSKAIISSSDDSSDEDKLKIADEGHPRHSNSNSNSDSEEDERPKRRSSSESDSDENQNRSGSEAGSPLRARRQQSEEDSDSDQDQPSQKRRTSGSEQSDNESVQSGRSPSAASENDSRPVSPSAESDRESERGSDNEGSGQGSGNESEPEGSNNEGSERGSDRGSDRGSDDSD