Sequence details NCBI ID: XM_004851411.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sbf2
Gene Name SET binding factor 2, transcript variant X3
Entrez Gene ID 101705040

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SBF2 ENSCPOG00000004716 (Guinea pig)

Gene Details

SET binding factor 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004248, Guinea pig)

Protein Percentage 96.26%
CDS Percentage 94.39%
Ka/Ks Ratio 0.10716 (Ka = 0.0186, Ks = 0.1736)

SBF2 ENSG00000133812 (Human)

Gene Details

SET binding factor 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000256190, Human)

Protein Percentage 95.78%
CDS Percentage 92.78%
Ka/Ks Ratio 0.08695 (Ka = 0.0212, Ks = 0.2435)

Sbf2 ENSMUSG00000038371 (Mouse)

Gene Details

SET binding factor 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033058, Mouse)

Protein Percentage 94.09%
CDS Percentage 88.96%
Ka/Ks Ratio 0.06833 (Ka = 0.0294, Ks = 0.4303)

RGD1559442 ENSRNOG00000009812 (Rat)

Gene Details

similar to SET binding factor 2 (RGD1559442), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013126, Rat)

Protein Percentage 94.22%
CDS Percentage 89.17%
Ka/Ks Ratio 0.07022 (Ka = 0.0294, Ks = 0.419)

Genome Location

Sequence Coding sequence

Length: 5547 bp    Location: 2383924..1907643   Strand: -
Raw sequence   
>XM_004851411.1
ATGGCCCGGCTGGCTGACTATTTCATTGTGGTAGGCTACGACCACGAGAAGCCAGGTAAGGGAGAAGGTCTGGGGAAAATAATCCAGAGATTTCCACAGAAGGACTGGGATGATACACCTTTTCCACAGGGGATTGAATTGTTTTGTCAGCCTGCTGGATGGCAGCTGTCCAGAGAGAGGAAGCAGCCGACATTCTTCGTGGTCGTACTAACAGATATTGACTCTGATAGACATTACTGCTCATGCTTAACCTTCTATGAGGCGGAGATCAATCTTCAGGGGACAAAGAAGGAAGAGATTGAAGGTGAAGAGGAAGTGTCTGATTTAATTCAGCCTGCAGAAGTGTTTGCTCCCAAAAGCCTGGTGTTGGTATCCAGATTAGATTATCCAGAAGTTTTTAGGGCTTGCCTGGGTCTGATCTATACTGTGTATGTGGACAGTCTGAATGTCTCCTTGGAAAGCCTCATTGCAAACCTTTGTGCCTGCCTTGTCCCAGCAGCTGGAGGGTCCCAGAAGCTGTTTTCCTTGGGTGCAGGAGATAGACAATTGATTCAGACTCCTTTACATGATAGTCTTCCTGTCACAGGCACTAGTGTGGCTCTCCTGTTCCAGCAGTTGGGAATTCAGAATGTCCTCAGCCTCTTTTGTGCAGTCCTTACAGAAAATAAGGTTCTCTTCCATTCTGCAAGTTTCCAGAGACTTAGTGATGCCTGTAGAGCCCTGGAATCTTTAATGTTTCCTCTTAAATATAGCTATCCTTATATTCCTATTCTCCCAGCTCAGCTACTAGAAGTTCTAAGTTCTCCAACACCTTTCATTATTGGAGTACATTCTATCTTTAAAACTGATGTCCATGAACTTTTAGATGTAATCATAGCAGATTTGGATGGAGGCACTATTAAAATTCCTGAATGTATTCACCTCTCTTCCCTCCCAGAACCACTTCTACATCAGACTCAAGCAGCTCTTTCCCTGATTTTACACCCAGATTTGGAAGTAGCAGATCATGCTTTTCCTCCTCCACGAACAGCTTTATCTCATTCAAAAATGCTGGATAAAGAAGTCCGAGCAGTTTTCCTTAGATTGTTTGCACAGCTTTTCCAAGGATATAGATCCTGCCTACAACTTATAAGAATTCATGCAGAGCCAGTAATACATTTTCACAAAACAGCTTTCTTGGGGCAGCGTGGTTTGATTGAGAATGATTTCCTCACTAAAGTACTCAATGGAATGGCATTTGCAGGATTTGTTTCAGAAAGAGGTCCTCCCTATAGAACCTGTGATCTCTTTGATGAGTTGGTAGCTTTTGAAGTAGAGAGAATTAAAGTTGAAGAAAATAATCCATTGAAGATGATAAAGCACATCAGAGAACTTGCTGAGCAACTATTCAAAAATGAGAATCCAAACCCTCATATGGCATTCCAGAAAGTTCCACGCCCAACAGAAGGATCACACTTGCGTGTTCACATTCTTCCTTTCCCAAAGATTAATGAAGCCCTGGTTCAGGAATTAATACAGGAAAATCTTGCTAAGAATCAGAATGCACCTCCTGCTACACGAATGGAAAAGAAATGTGTTGTGCCAGCAGGTCCACCTGTTGTTTCAATAATGGATAAAGTGACGACAGTTTTCAATAGTGCACAGAGACTGGAAGTTGTTAGAAACTGTATCTCATTCATATTTGAGAACAAAACTTTGGAGACTGAAAAGACCCTTCCTGCTGCCCTGAGGGCCCTTAAAGGAAAGGCAGCAAGACAGTGTCTCACAGATGAACTGGGTTTGCATGTCCAGCAAAACCGAGCGATATTGGACCATCAACAATTTGATTACATAATAAGGATGATGAATTGTACTCTACAGGATTGTTCAAGTTTAGAAGAGTATAACATTGCTGCAGCATTACTCCCTTTGACTAGTGCTTTCTATAGGAAACTTGCTCCTGGAGTCAGCCAGTTTGCTTACACCTGTGTACAGGACCACCCCATTTGGACAAATCAGCAGTTTTGGGAGACAACTTTTTACAATGCAGTGCAGGAACAAGTCCGCTCCCTGTATCTTTCAACAAAGGAAGACAATCACACCCCACACCTGAAGCAAAAGGATAAGCTTCCTGATGACCAGTATCAGGAAAAGACAGCCATGGACCTGGCAGCTGAGCAGCTGCGCCTTTGGCCCACTCTGAGCAAATCAACTCAGCAAGAATTAGTGCAACGTGAAGAAAGCACTGTCTTCAGTCAGGCCATTCACTTTGCAAATCTCATGGTCAACCTACTGGTTCCACTAGACACAAGTAAAAACAAGCTCCTGAGAGCATCAGCACCAGGTGACTGGGAGAGTGGAAGCAACAGCATTGTCACAAACAGTATTGCCGGAAGTGTAGCTGAGAGCTATGATACAGAGAGTGGGTTTGAAGATTCAGAGAACAATGACATTGCTAATTCTATCGTACGGTTCATTACCCGATTTATTGACAAGGTTTGTACAGAAAGTGGAGTTACTCAGGATCACATCAAGAGCCTTCATTGTATGATACCAGGAATTGTAGCTATGCACATTGAGACCCTAGAAGCAGTGCATCGTGAGAGTAGAAGACTTCCACCTATACAGAAGCCCAAGATTCTAAGACCTGCTTTGCTGCCAGGAGAAGAAATTGTATGTGAAGGTCTTCGAGTCCTGCTTGATCCTGATGGCAGAGAAGAAGCCACTGGAGGCCTTCTTGGAGGCCCTCAGCTCCTGCCAGCAGAAGGAGCTTTGTTCCTCACCACATACAGAATTCTGTTCAGAGGGACACCTCATGACCAGCTAGTTGGTGAACAGACAGTTGTGAGGAGCTTCCCCATTGCCTCCATCACCAAGGAGAAGAAGATCACAATGCAGAACCAGCTACAACAGAACATGCAAGAAGGATTGCAGATTACATCAGCATCTTTTCAGTTGATTAAAGTAGCTTTTGATGAGGAAGTCAGTCCAGAAGTAGTAGAGATCTTTAAGAAACAGCTAATGAAGTTCCGTTATCCTCAGTCCATTTTCAGCACCTTCGCTTTTGCTGCTGGACAAACCACCCCACAAATAATTTTACCCAAACAAAAGGAAAAGAATACTTCCTTTCGTACCTTTTCAAAAACAATTGTGAAAGGTGCCAAAAGGGCAGGGAAAATGACAATTGGCCGACAGTATTTATTGAAGAGGAAGACAGGAACAATTGTGGAAGAGAGAGTAAATCGTCCTGGATGGAATGAAGACGATGACATATCAGTTTCAGATGATAGTGAACTCCCCACAAGTACCCTGAAGCCCTCAGAGAAGTCTACAATGGAACAGTTAGTGGAAAAGGCTTGTTTCAGAGACTATCAGCGGTTAGGTTTGGGAACCATAAGTGGCACCTCATCCCGTTCAAAACCAGAGTATTTCCGAATCACTGCCTCCAACAGGATGTATTCTCTGTGCCGAAGCTATCCTGGCCTTTTAGTCATACCTCAAGCTGTTCAGGACAGTAGTTTACCAAGAGTAGCCCGCTGCTATCGACACAATCGCTTGCCTGTTGTATGTTGGAAGAACTCAAGAAGTGGTACTCTGCTCCTTCGATCTGGAGGATTCCATGGGAAAGGAGTTGTTGCTCTTTTTAAATCTCAGAACTCCCCTCAGGCAGCTCCTACCTCCTCTTTAGAATCTTCCAGTACCATAGAACAAGAAAAGTACTTGCAAGCCTTACTGAATGCAGTTTCTGTCCATCAGAAACTCAGAAGCAACAACACCCTTACTGTCAGGCCAGCACTTGCTCTGTCTCCAGGTGTATGGGCAAGTCTTCGCTCCAGCACTCGCTTGATCAGCTCTCCAACATCCTTCATTGATGTTGGCGCCCGGCTGGCAGGCAAGGATCACTCGACCCCCTTCAGTAATAGCACCTACCTACAAAACCAGCTCTTGAAACGCCAAGCAGCCCTTTATATATTTGGTGAAAAGTCACAACTAAGGAGCTTCAAGGTAGAATTTGCTTTAAATTGTGAGTTTGTTCCTGTAGAATTTCATGAAATCCGACAAGTGAAAGCCAGTTTTAAAAAGCTGATGAGGGCTTGTATCCCAAGCACCATTCCTACTGACTCAGAAGTGACCTTCCTGAAGGCCCTGGGAGACTCTGAGTGGCTCCCACAGATTCATAGGATAATGCAGCTGGCTGTGGTGGTAGCAGAAGTACTCGAGAATGGCTCCTCAGTCTTGATCTGTTTGGAAGAAGGCTGGGATATCACTGCACAAGTGACCTCCCTGGTACAGTTACTCAGTGATCCCTTTTATAGGACACTTGAAGGTTTCAGAATGTTGGTTGAAAAAGAGTGGCTCTCTTTTGGTCATAAATTCAGTCAGAGGAGCAGCTTGACCCTCAACTCTCAGGGTAGTGGTTTTGCTCCAGTCTTCCTGCAATTCTTAGACTGTGTACACCAGGTTCACAACCAGTATCCTACTGAGTTTGAATTCAATCTCTATTACTTAAAGTTCTTGGCCTTCCACTATGTATCTAATCGCTTTAAAACTTTTCTCCTGGATTCAGACTATGAAAGATTAGAACACGGAACTTTATTTGATGATAAAGGAGACAAGCATGCCAAGAAAGGAATTTGTATTTGGGAGTGTATTGATAAAACACATAAGAGGAGTCCCATTTTCTTTAATTATTTATATTCACCAGTGGAAATAGAGGCCCTGAAGCCCAATGTAAACATCTCCAGCCTCAAGAAGTGGGATTACTACATAGAGGAAACCCTGTCTTCAGGGCCTTCATATGACTGGATGATGCTAACTCCCAAGCACTTCCCCTCTGAAGAGTCTGATCTGGCTGGAGGAGCTGGCCCCCAGAGCCAGAGAAAGACAGTGTGGCCGTGCTATGATGATGTCAGCTGTACTCAGCCCGATGCTCTCACCAGCCTTTTCAATGAAATTGAAAAATTGGAGCATAAATTGAACCAAACTCCTGAGAAGTGGCAGCAGCTGTGGGAAAAGGTAACCATGGACCTTAAGGAAGAGCAAAGAGCAGACCATGTCCAGAGACATCCTTCAGGATCCCCAGGAATTGTGTCTACCAACCTACCTTCCTATCAGAAGAGGCCTACACTGCACCTGCCAGACAGCAGCATGAGCGAGGAACAGAACGCCAGCATCTCACCATCTAATGGAGTGGAGCGAAGGGCAGCCACACTCTACAGTCAGTACACATCCAGGAATGATGAGAACAGGTCCTTTGAGGGAACACTTTACAAAAGAGGGGCTCTGCTGAAAGGCTGGAAACCCCGTTGGTTTGTACTGGATGTAACAAAACATCAGCTGCGATACTATGACTCTGGTGAAGACACAAGCTGCAAAGGCCACATTGATCTGGCTGAAGTAGAAATGGTCATCCCTGCTGGCCCCAGCCTGGGCGCTCCAAAGCACACAAATGACAAGGCTTTCTTTGATCTCAAGACGAGTAAACGTGTATATAACTTCTGTGCCCAAGATGGGCAGAGTGCCCAGCAGTGGATGGACAGAATCCAGAGCTGTATCTCTGATGCCTGA

Related Sequences

XP_004851468.1 Protein

Sbf2 PREDICTED: myotubularin-related protein 13 isoform X3 [Heterocephalus glaber]

Length: 1848 aa      View alignments
>XP_004851468.1
MARLADYFIVVGYDHEKPGKGEGLGKIIQRFPQKDWDDTPFPQGIELFCQPAGWQLSRERKQPTFFVVVLTDIDSDRHYCSCLTFYEAEINLQGTKKEEIEGEEEVSDLIQPAEVFAPKSLVLVSRLDYPEVFRACLGLIYTVYVDSLNVSLESLIANLCACLVPAAGGSQKLFSLGAGDRQLIQTPLHDSLPVTGTSVALLFQQLGIQNVLSLFCAVLTENKVLFHSASFQRLSDACRALESLMFPLKYSYPYIPILPAQLLEVLSSPTPFIIGVHSIFKTDVHELLDVIIADLDGGTIKIPECIHLSSLPEPLLHQTQAALSLILHPDLEVADHAFPPPRTALSHSKMLDKEVRAVFLRLFAQLFQGYRSCLQLIRIHAEPVIHFHKTAFLGQRGLIENDFLTKVLNGMAFAGFVSERGPPYRTCDLFDELVAFEVERIKVEENNPLKMIKHIRELAEQLFKNENPNPHMAFQKVPRPTEGSHLRVHILPFPKINEALVQELIQENLAKNQNAPPATRMEKKCVVPAGPPVVSIMDKVTTVFNSAQRLEVVRNCISFIFENKTLETEKTLPAALRALKGKAARQCLTDELGLHVQQNRAILDHQQFDYIIRMMNCTLQDCSSLEEYNIAAALLPLTSAFYRKLAPGVSQFAYTCVQDHPIWTNQQFWETTFYNAVQEQVRSLYLSTKEDNHTPHLKQKDKLPDDQYQEKTAMDLAAEQLRLWPTLSKSTQQELVQREESTVFSQAIHFANLMVNLLVPLDTSKNKLLRASAPGDWESGSNSIVTNSIAGSVAESYDTESGFEDSENNDIANSIVRFITRFIDKVCTESGVTQDHIKSLHCMIPGIVAMHIETLEAVHRESRRLPPIQKPKILRPALLPGEEIVCEGLRVLLDPDGREEATGGLLGGPQLLPAEGALFLTTYRILFRGTPHDQLVGEQTVVRSFPIASITKEKKITMQNQLQQNMQEGLQITSASFQLIKVAFDEEVSPEVVEIFKKQLMKFRYPQSIFSTFAFAAGQTTPQIILPKQKEKNTSFRTFSKTIVKGAKRAGKMTIGRQYLLKRKTGTIVEERVNRPGWNEDDDISVSDDSELPTSTLKPSEKSTMEQLVEKACFRDYQRLGLGTISGTSSRSKPEYFRITASNRMYSLCRSYPGLLVIPQAVQDSSLPRVARCYRHNRLPVVCWKNSRSGTLLLRSGGFHGKGVVALFKSQNSPQAAPTSSLESSSTIEQEKYLQALLNAVSVHQKLRSNNTLTVRPALALSPGVWASLRSSTRLISSPTSFIDVGARLAGKDHSTPFSNSTYLQNQLLKRQAALYIFGEKSQLRSFKVEFALNCEFVPVEFHEIRQVKASFKKLMRACIPSTIPTDSEVTFLKALGDSEWLPQIHRIMQLAVVVAEVLENGSSVLICLEEGWDITAQVTSLVQLLSDPFYRTLEGFRMLVEKEWLSFGHKFSQRSSLTLNSQGSGFAPVFLQFLDCVHQVHNQYPTEFEFNLYYLKFLAFHYVSNRFKTFLLDSDYERLEHGTLFDDKGDKHAKKGICIWECIDKTHKRSPIFFNYLYSPVEIEALKPNVNISSLKKWDYYIEETLSSGPSYDWMMLTPKHFPSEESDLAGGAGPQSQRKTVWPCYDDVSCTQPDALTSLFNEIEKLEHKLNQTPEKWQQLWEKVTMDLKEEQRADHVQRHPSGSPGIVSTNLPSYQKRPTLHLPDSSMSEEQNASISPSNGVERRAATLYSQYTSRNDENRSFEGTLYKRGALLKGWKPRWFVLDVTKHQLRYYDSGEDTSCKGHIDLAEVEMVIPAGPSLGAPKHTNDKAFFDLKTSKRVYNFCAQDGQSAQQWMDRIQSCISDA