Details from NCBI annotation

Gene Symbol Cacfd1
Gene Name calcium channel flower domain containing 1, transcript variant X4
Entrez Gene ID 101713938

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CACFD1 ENSCPOG00000011690 (Guinea pig)

Gene Details

calcium channel flower domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010514, Guinea pig)

Protein Percentage 86.47%
CDS Percentage 88.24%
Ka/Ks Ratio 0.18543 (Ka = 0.0782, Ks = 0.4218)

CACFD1 ENSG00000160325 (Human)

Gene Details

calcium channel flower domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000440832, Human)

Protein Percentage 78.36%
CDS Percentage 80.12%
Ka/Ks Ratio 0.18818 (Ka = 0.1465, Ks = 0.7784)

Cacfd1 ENSMUSG00000015488 (Mouse)

Gene Details

calcium channel flower domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000109640, Mouse)

Protein Percentage 88.89%
CDS Percentage 85.96%
Ka/Ks Ratio 0.07196 (Ka = 0.0544, Ks = 0.7566)

Cacfd1 ENSRNOG00000005840 (Rat)

Gene Details

calcium channel flower domain containing 1 (Cacfd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007677, Rat)

Protein Percentage 87.72%
CDS Percentage 85.19%
Ka/Ks Ratio 0.06469 (Ka = 0.0591, Ks = 0.9141)

Genome Location

Sequence Coding sequence

Length: 516 bp    Location: 1889953..1896176   Strand: +
>XM_004848965.1
ATGAGCGGCTCCGGCGGGCCGGGGGCGCCCGCGGGCCCTGCGCCGCCCGCACAGGAGGAGGGCATGACGTGGTGGTGGCGCTGGCTGTGCCGCCTGTCGGGCGTGCTGGGGGCCGTCTCCTGTGCTGTCTCCGGCCTCTTCAGCTGCATAACCATCCACCCCCTGAACATTGCGGCTGGTGTGTGGATGATCATGAACGCCTTTATCCTGTTGCTGTGTGAGGTGCCCTTCTGCTGCCAGTTCGTGGAGTTTGCAAACGCAGTGGCCGAGAGGGTGGACCAGCTGCGCTCATGGCAGAAGGCTGTCTTCTACTGCGGGATGGCCGTCGTCCCCATCATCATGAGCCTGACCCTGACCACGCTGCTGGGCAATGCTGTCGCCTTTGCCACCGGGGTGCTGTATGGACTCTCTGCTTTGGGCAAAAAAGGTGATGCCATCTCCTACGCCCGGATCCAGCAGCAGAAGCAGCAGGTGGATGAGGAGAAGTTGGTGGAGACTGTGGAAGGGGAGCTGTGA

Related Sequences

XP_004849022.1 Protein

Cacfd1 PREDICTED: calcium channel flower homolog isoform X4 [Heterocephalus glaber]

Length: 171 aa      View alignments
>XP_004849022.1
MSGSGGPGAPAGPAPPAQEEGMTWWWRWLCRLSGVLGAVSCAVSGLFSCITIHPLNIAAGVWMIMNAFILLLCEVPFCCQFVEFANAVAERVDQLRSWQKAVFYCGMAVVPIIMSLTLTTLLGNAVAFATGVLYGLSALGKKGDAISYARIQQQKQQVDEEKLVETVEGEL