Details from NCBI annotation

Gene Symbol Sub1
Gene Name SUB1 homolog (S. cerevisiae), transcript variant X2
Entrez Gene ID 101722999

Database interlinks

Part of NW_004624759.1 (Scaffold)

For more information consult the page for NW_004624759.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SUB1 ENSCPOG00000005584 (Guinea pig)

Gene Details

SUB1 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005031, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 95.54%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.2153)

SUB1 ENSG00000113387 (Human)

Gene Details

SUB1 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000265073, Human)

Protein Percentage 100.0%
CDS Percentage 93.7%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.4343)

Sub1 ENSMUSG00000022205 (Mouse)

Gene Details

SUB1 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022816, Mouse)

Protein Percentage 93.7%
CDS Percentage 88.71%
Ka/Ks Ratio 0.05713 (Ka = 0.0326, Ks = 0.5711)

SUB1 ENSRNOG00000050563 (Rat)

Gene Details

Activated RNA polymerase II transcriptional coactivator p15

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067467, Rat)

Protein Percentage 93.7%
CDS Percentage 89.76%
Ka/Ks Ratio 0.06866 (Ka = 0.0325, Ks = 0.474)

Genome Location

Sequence Coding sequence

Length: 384 bp    Location: 22027791..22013107   Strand: -
>XM_004848658.1
ATGCCTAAATCAAAGGAACTTGTTTCTTCAAGCTCTTCGGGCAGCGATTCTGACAGTGAAGTTGACAAGAAGTTAAAGAGGAAAAAGCAAGTTGCCCCAGAAAAACCTGTTAAGAAGCAAAAGACTGGTGAAACTTCAAGAGCTTTGTCATCTTCTAAGCAGAGCAGCAGCAGCAGAGATGATAACATGTTTCAGATTGGGAAAATGAGGTATGTCAGTGTTCGGGACTTTAAAGGGAAAGTTCTAATTGATATTAGAGAATATTGGATGGATCCAGAAGGTGAAATGAAACCAGGAAGAAAAGGTATTTCTTTAAATCCGGAGCAATGGAGCCAGCTGAAGGAGCAGATTTCCGACATTGATGATGCAGTAAGAAAACTGTAG

Related Sequences

XP_004848715.1 Protein

Sub1 PREDICTED: activated RNA polymerase II transcriptional coactivator p15 isoform X2 [Heterocephalus glaber]

Length: 127 aa      View alignments
>XP_004848715.1
MPKSKELVSSSSSGSDSDSEVDKKLKRKKQVAPEKPVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL