Sequence details NCBI ID: XM_004847408.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Letm1
Gene Name leucine zipper-EF-hand containing transmembrane protein 1, transcript variant X4
Entrez Gene ID 101710555

Database interlinks

Part of NW_004624755.1 (Scaffold)

For more information consult the page for NW_004624755.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LETM1 ENSCPOG00000011337 (Guinea pig)

Gene Details

leucine zipper-EF-hand containing transmembrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010193, Guinea pig)

Protein Percentage 87.54%
CDS Percentage 86.4%
Ka/Ks Ratio 0.12522 (Ka = 0.0752, Ks = 0.6009)

LETM1 ENSG00000168924 (Human)

Gene Details

leucine zipper-EF-hand containing transmembrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000305653, Human)

Protein Percentage 85.35%
CDS Percentage 83.67%
Ka/Ks Ratio 0.07988 (Ka = 0.0836, Ks = 1.0462)

Letm1 ENSMUSG00000005299 (Mouse)

Gene Details

leucine zipper-EF-hand containing transmembrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000005431, Mouse)

Protein Percentage 81.68%
CDS Percentage 80.14%
Ka/Ks Ratio 0.08043 (Ka = 0.1059, Ks = 1.3166)

Letm1 ENSRNOG00000016427 (Rat)

Gene Details

leucine zipper-EF-hand containing transmembrane protein 1 (Letm1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022540, Rat)

Protein Percentage 82.36%
CDS Percentage 80.19%
Ka/Ks Ratio 0.08201 (Ka = 0.1044, Ks = 1.2726)

Genome Location

Sequence Coding sequence

Length: 2217 bp    Location: 25604454..25631974   Strand: +
Raw sequence   
>XM_004847408.1
ATGGCGTCCATCTTGCTGAGGAGCTGTCGCGGTCGGGCGCCCGTCCGCCTCCCGCCGCCCGGCTCCGCCGCCCCGCGGGGGCTGCCTGGGGAGCCTCATGCAGGGTGTGCTTCTCTGCTTGGTCTGGTTTTTGTTTTGACTGTCCCCTCTGGCTGCTGTGCCCCGGCCCACCCTTTGTACCTGTACCTCAGAGTGGAGCCCTGTGGCCACTGGACACTGAGGCCTGAGCGCCTGTGTATGGTGGCAGGAGCACCATGGACTCCCACTGCAGTGGGTGTGGTTGTCGGGGGGCCCAGGTACCTTCCTGTGCGTGGCTGGCATTCGTCACCCTGTCTCAGCGATGACTCTGTGGTGGAGAAGTCCCTCAAGTCCCTGAAGGACAAGAACAAAAAGCTGGAGGAGGGCGGCCCCGTGTACAGCCCAGCGGCCCCGGTGGCAGTGAAGAAGTCCCTGGGGCAGAGGGTGCTGGACGAGCTCAAGCACTACTACCACGGCTTCCGCCTGCTGTGGATCGACACCAAGATCGCCGCACGCATGCTCTGGCGCATCCTGCACGGCCACGCACTGACCCGCCGGGAGCGTAGACAGTTCCTCCGCATCTGTGCCGACCTCTTCCGCCTGGTGCCTTTCCTGGTCTTCGTGGTGGTCCCCTTCATGGAGTTCCTGCTGCCTGTGGCCGTGAAGCTCTTTCCCAACATGCTGCCGTCCACGTTTGAGACCCAGTCCATCAAGGAAGAGAGGCTGAAGAAGGAGCTGCGGGTCAAGCTGGAGCTGGCCAAGTTCCTCCAGGACACCATCGAGGAGATGGCACTGAAGAACAAGGCGGCCAAGGGCAGCGCCACCCAGGACTTCTCCGTGTTCTTCCAGAAGATCCGTGAGACGGGGGAGAGGCCCAGCAACGAGGAAATCATGCGCTTCTCCAAGCTGTTCGAGGATGAGCTGACCCTGGACAACCTCACGCGGCCGCAGCTGGTGGCGCTGTGCAAGCTGCTGGAGCTGCAGTCCATTGGCACCAACAACTTCCTGCGCTTCCAGCTCACTATGCGGCTGCGGTCCATAAAGGCCGATGACAAGCTGATCGCTGAGGAAGGGGTGGACAGCCTGAATGTCAAGGAGCTGCAAGCGGCATGCCGGGCACGGGGCATGCGGGCCCTTGGCGTCACCGAGGACCGGCTGCGAAGCCAGCTGAAGCAGTGGTTGGACCTGCACCTGCACCAGGAGGTGCCCACATCGCTGCTCGTGTTATCTCGGGCCATGTATCTCCCCGACACTCTCTCACCTGCTGACCAGCTCAAGTCTACGCTCCAGACCCTCCCGGAGATTGTGGCCAAGGAGGCCCAGGTGAAAGCAGCCGAGGTGGAAGGCGAGCAGGTGGACAACAAGGCCAAGCTAGAGGCCACACTGCAGGAGGAGGCCGCCATCCGGCAGGAGCACCACGAGAAGGAGCTGCAGCGGGCCGCAGAGGTGGAGAAGGGCGCTGAGCTAGAAGGTGTGGGTGCCACCACCCCTGAGAAGCCTGTGGCCGAGCTGCGACCGGAGATGCCTGATGTGATCCTGCCCTCTGAGGCCCTGAAGGACACTGCCCCTGTGCTGGAGGGCTTGAAGGAAGAGGAAATAACTAAGGAGGAAATAGATGTCCTGAGCGATGCCTGCTCCAAGTTGAAGGAGCAGAAGAAGTCGCTGACCAAGGAGAAGGAGGAGCTGGAGCTGCTGAAGGAGGACGTCCAGGACTACAGTGAGGACTTGCGAGAGATCAAGAGGGAGCTTTCCAAGACTGGTGAGGACAAGCTCGTGGAGGAATCGAAAGCCAGCAAGAGGCTGACACAGCGGGTGCAGCAGATGATCGGCCAGATCGATGGGCTCATCGCGCAGCTGGAGGCGGGCCAGCAGACTGGCAGGCTGGGCCCAGACGAGAGCGCGCCCGGGGGGGAGAACGTCATCAGTGTCACGGAGCTCATCAGTGCCATGAAACAAATCAAGCACATTCCAGAAAACAAGCTGGTCAGCTTGGCCTCTGCACTAGATGAAAATAAGGACGGCAAGATCAACATCGACGACCTTGTCAAGGTGATCGAGCTGGTAGACAAAGAAGACATACACATCTCCACCAGCCAGGTGGCTGAGATTGTGGCCACACTGGAGAAGGAAGAGAAGGTGGGGGAGCAGGAGAAGGCCAAGGAGAAGGCCGAGAAGGAGGCGGCAGAGGTGCAGAACTAG

Related Sequences

XP_004847465.1 Protein

Letm1 PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial isoform X4 [Heterocephalus glaber]

Length: 738 aa      View alignments
>XP_004847465.1
MASILLRSCRGRAPVRLPPPGSAAPRGLPGEPHAGCASLLGLVFVLTVPSGCCAPAHPLYLYLRVEPCGHWTLRPERLCMVAGAPWTPTAVGVVVGGPRYLPVRGWHSSPCLSDDSVVEKSLKSLKDKNKKLEEGGPVYSPAAPVAVKKSLGQRVLDELKHYYHGFRLLWIDTKIAARMLWRILHGHALTRRERRQFLRICADLFRLVPFLVFVVVPFMEFLLPVAVKLFPNMLPSTFETQSIKEERLKKELRVKLELAKFLQDTIEEMALKNKAAKGSATQDFSVFFQKIRETGERPSNEEIMRFSKLFEDELTLDNLTRPQLVALCKLLELQSIGTNNFLRFQLTMRLRSIKADDKLIAEEGVDSLNVKELQAACRARGMRALGVTEDRLRSQLKQWLDLHLHQEVPTSLLVLSRAMYLPDTLSPADQLKSTLQTLPEIVAKEAQVKAAEVEGEQVDNKAKLEATLQEEAAIRQEHHEKELQRAAEVEKGAELEGVGATTPEKPVAELRPEMPDVILPSEALKDTAPVLEGLKEEEITKEEIDVLSDACSKLKEQKKSLTKEKEELELLKEDVQDYSEDLREIKRELSKTGEDKLVEESKASKRLTQRVQQMIGQIDGLIAQLEAGQQTGRLGPDESAPGGENVISVTELISAMKQIKHIPENKLVSLASALDENKDGKINIDDLVKVIELVDKEDIHISTSQVAEIVATLEKEEKVGEQEKAKEKAEKEAAEVQN