Details from NCBI annotation

Gene Symbol Lrrc20
Gene Name leucine rich repeat containing 20, transcript variant X4
Entrez Gene ID 101714611

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC20 ENSCPOG00000006247 (Guinea pig)

Gene Details

leucine rich repeat containing 20

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005634, Guinea pig)

Protein Percentage 92.39%
CDS Percentage 90.94%
Ka/Ks Ratio 0.08406 (Ka = 0.0354, Ks = 0.4211)

LRRC20 ENSG00000172731 (Human)

Gene Details

leucine rich repeat containing 20

External Links

Gene Match (Ensembl Protein ID: ENSP00000348043, Human)

Protein Percentage 90.22%
CDS Percentage 88.41%
Ka/Ks Ratio 0.06073 (Ka = 0.0476, Ks = 0.7841)

Lrrc20 ENSMUSG00000037151 (Mouse)

Gene Details

leucine rich repeat containing 20

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000048042, Mouse)

Protein Percentage 88.59%
CDS Percentage 85.69%
Ka/Ks Ratio 0.06818 (Ka = 0.058, Ks = 0.851)

Lrrc20 ENSRNOG00000000560 (Rat)

Gene Details

leucine rich repeat containing 20 (Lrrc20), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000676, Rat)

Protein Percentage 89.67%
CDS Percentage 86.78%
Ka/Ks Ratio 0.05596 (Ka = 0.0468, Ks = 0.8369)

Genome Location

Sequence Coding sequence

Length: 555 bp    Location: 4500710..4428171   Strand: -
>XM_004846204.1
ATGCTGAAGAAGATGGGCGAGGCGGTGGCCAGAGTTGCGAGGAAGGTCAATGAGACAGTGGAGAGCAGCTCTGACACGCTGGACCTGGCTGAGTGTAAGCTGGTTTCCTTCCCCATCGGCATCTACAAGGTCCTGCGGAATGTCTCAGACCAGATCCACCTCATCACACTGGCCAACAACGAGCTCAAGTCCCTCACCAGCAAGTTCATGACCACATTCAGTCAGCTCCGAGAGCTCCGCCTAGAAGGGAACTTCCTACATCGTCTCCCCAATGAGGTCAGCAACCTGCAGCACCTCAAGGCTATCGACCTGTCCCGGAACCAGTTCCGAGACTTCCCAGAGCAGCTCACCACCCTGCCAGTGCTGGAGACTATCAACCTGGAGGAGAACGAGATCATGGATGTGCCTGTGGAGAAGCTGGCCACCATGCCAGCCCTGCGCACTGTCAATCTCCGCCTCAACCCACTGAGCGCCGAGGTGCGTGTCATCGCCCCGCCACTCATCAAGTTTGACCTGGTCACATCCCCAGAGGGTGCACGAGCCCCTCCACCTTAG

Related Sequences

XP_004846261.1 Protein

Lrrc20 PREDICTED: leucine-rich repeat-containing protein 20 isoform X4 [Heterocephalus glaber]

Length: 184 aa      View alignments
>XP_004846261.1
MLKKMGEAVARVARKVNETVESSSDTLDLAECKLVSFPIGIYKVLRNVSDQIHLITLANNELKSLTSKFMTTFSQLRELRLEGNFLHRLPNEVSNLQHLKAIDLSRNQFRDFPEQLTTLPVLETINLEENEIMDVPVEKLATMPALRTVNLRLNPLSAEVRVIAPPLIKFDLVTSPEGARAPPP