Sequence details NCBI ID: XM_004846032.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Zc2hc1b
Gene Name zinc finger, C2HC-type containing 1B
Entrez Gene ID 101720759

Database interlinks

Part of NW_004624753.1 (Scaffold)

For more information consult the page for NW_004624753.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ZC2HC1B ENSCPOG00000022028 (Guinea pig)

Gene Details

zinc finger, C2HC-type containing 1B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016989, Guinea pig)

Protein Percentage 79.5%
CDS Percentage 85.33%
Ka/Ks Ratio 0.37637 (Ka = 0.1193, Ks = 0.3168)

ZC2HC1B ENSG00000118491 (Human)

Gene Details

zinc finger, C2HC-type containing 1B

External Links

Gene Match (Ensembl Protein ID: ENSP00000237275, Human)

Protein Percentage 76.58%
CDS Percentage 81.23%
Ka/Ks Ratio 0.31755 (Ka = 0.1498, Ks = 0.4717)

Zc2hc1b ENSMUSG00000019815 (Mouse)

Gene Details

zinc finger, C2HC-type containing 1B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000019954, Mouse)

Protein Percentage 74.42%
CDS Percentage 78.29%
Ka/Ks Ratio 0.23335 (Ka = 0.1563, Ks = 0.6698)

Zc2hc1b ENSRNOG00000042705 (Rat)

Gene Details

zinc finger, C2HC-type containing 1B (Zc2hc1b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061585, Rat)

Protein Percentage 79.87%
CDS Percentage 80.95%
Ka/Ks Ratio 0.17511 (Ka = 0.1137, Ks = 0.6493)

Genome Location

Sequence Coding sequence

Length: 747 bp    Location: 10427977..10363920   Strand: -
Raw sequence   
>XM_004846032.1
ATGTCTGGGGCAGAACCATTTTTGGCAGATGGCAGTCAGGAGTTGTTTCCCTGTGAAGTCTGTGGAAGACGCTTTGCAGCAGATGTTCTGAAAAGACATGGACCAATATGTAGAAAACTCTTCCACAAAAAGCGTAAACTTTTCAATTCCTTGAAGCAGAGATTACAGGGCATGGACATTCCCACTGTAAGGAAGGCCCCTCCATCCAAGTCTCAACCTGTGAGGAAATCTAACTGGAGACAACAACATGAAGATTTCATTAACGCAATTCAATCCGTAAAGCAGTGCACCCTAGCTGTGAGAGAAGGCCGGCCTCTGCCTCCTGCACCCACTCCGAGTGTCAATCCAGATTATATCCAATGCCCATATTGTATGAGGAGATTTAATGAAACCGCAGCCGGTCGGCATATTAATTTCTGCAAAGATCAGTCTTCTCGCCGAGTCTTTGATCCAGCTCAGACTGCAGCTAAATTGGCTTCCAGAGCTCAGGGTAGGGCTCAGGCGAGTCCCAGGAAAGAACCAACTGTCACTCGTGCCGTGGGAGCTTTGCTACAGAGCAGGCCCATGGAGGCAAAGACTGAGGTCTCAACCAAGTCCAGCTGGCTCTCTGAAACTCTGAAGCCTGGTAATCCCACCCAGGAATGCCACCTCAGGGAAAGGAGGAAAGGAAGTGTCTGTCTTTTCCGGTCACCACTCCGATCTTCAGTTTTCCTCCTTATTTATTCTTTTTTGAAAAAAAGTTATTAA

Related Sequences

XP_004846089.1 Protein

Zc2hc1b PREDICTED: zinc finger C2HC domain-containing protein 1B [Heterocephalus glaber]

Length: 248 aa      View alignments
>XP_004846089.1
MSGAEPFLADGSQELFPCEVCGRRFAADVLKRHGPICRKLFHKKRKLFNSLKQRLQGMDIPTVRKAPPSKSQPVRKSNWRQQHEDFINAIQSVKQCTLAVREGRPLPPAPTPSVNPDYIQCPYCMRRFNETAAGRHINFCKDQSSRRVFDPAQTAAKLASRAQGRAQASPRKEPTVTRAVGALLQSRPMEAKTEVSTKSSWLSETLKPGNPTQECHLRERRKGSVCLFRSPLRSSVFLLIYSFLKKSY