Details from NCBI annotation

Gene Symbol Smc1b
Gene Name structural maintenance of chromosomes 1B
Entrez Gene ID 101700152

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMC1B ENSCPOG00000014352 (Guinea pig)

Gene Details

structural maintenance of chromosomes 1B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012928, Guinea pig)

Protein Percentage 89.28%
CDS Percentage 88.06%
Ka/Ks Ratio 0.15096 (Ka = 0.0587, Ks = 0.3887)

SMC1B ENSG00000077935 (Human)

Gene Details

structural maintenance of chromosomes 1B

External Links

Gene Match (Ensembl Protein ID: ENSP00000350036, Human)

Protein Percentage 85.43%
CDS Percentage 87.42%
Ka/Ks Ratio 0.24195 (Ka = 0.0834, Ks = 0.3446)

Smc1b ENSMUSG00000022432 (Mouse)

Gene Details

structural maintenance of chromosomes 1B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023068, Mouse)

Protein Percentage 81.8%
CDS Percentage 84.39%
Ka/Ks Ratio 0.21202 (Ka = 0.1051, Ks = 0.4955)

Smc1b ENSRNOG00000032570 (Rat)

Gene Details

structural maintenance of chromosomes 1B (Smc1b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000043834, Rat)

Protein Percentage 82.44%
CDS Percentage 84.25%
Ka/Ks Ratio 0.18128 (Ka = 0.0985, Ks = 0.5435)

Genome Location

Sequence Coding sequence

Length: 3714 bp    Location: 4255897..4320665   Strand: +
>XM_004845405.1
ATGGGCTACCTGAAGGTGTTGCTCGTGGAGAACTTCAAATCCTGGCGGGGTCGCCAGGTCATTGGGCCTTTCGAGAGGTTTACGTGTATCATCGGCCCCAACGGCTCCGGAAAATCTAATATAATGGATGCACTTAGCTTTGTCATGGGAGAGAAAATAACTAATTTAAGAGTGAAAAGTATTCAAGAACTTATTCATGGTGCACATGTTGGAAAACCTGTTTCTTCTTCTGCAAGTGTAAGAATTGTATATGTGGAGGAAAGTGGAGAAGAGAAAACATTTGCACGGATTATCCGAGGGGGATGCTCGGAATTCTATTTTGGTGATAACCCTGTGACTCGCTCTGCCTACATAGCAGAGTTGGAGAAGATAGGCATAATAGGCAAAGCACGAAACTGTCTTGTTTTTCAGGGAACTGTAGAGTTGATTTCCATGAAGAAACCCAAAGAAAGAACCCGGTTTTTTGAGGAGATCAGCACTTCTGGAGAGCTTATGGAAGAGTATGAGGAAAAGAAAAGAAAGTTACAAAAGGCTGAGGAAAATGCACAATTTAATTTTAATAAGAAAAAGAATGCAGCTGCAGAGCGTAAGCATGCAAAATTAGAGAAAGAAGAGGCAGACCGTTACCAAAGTCTCCTTGAAGAACTGAAGACAAACAAGATACAACTGCAGCTGTTCCAACTATATCATAATGAGAAAAAAATTCATTTCCTGAATGTTGAGTTAGAGCATGTGAATAGGGATTTGAGTGTCATGAAAGAGTCCCATTTTCATCATGAAAACATAGTTAAAGCCAAGAAAAAGGAGCATGGAATGCTAACTAGACAACTACAACAAACAGAGAAAGAATTGAAATCTCTTGAAGCACTTTTAAATCAGAAGAGGCCTCAGTACATTAAAGCCAAAGAAAATACTTCTCACCACCTCAAGAAATTAGATATATCTAAGAAATCAATAAAGGATTGTGAAAAACAGTGTTCTAAGCAGGAAGATGACATAAGAGCCCTGCAGGCAGAGCTGGTTGATTTAGATAGTGCATGGAAAAGTTTTGAAAAACAGATTGAAGAAGAAATCTTGCATAAAGAGCGAGGCATTGAACTGGAACCCAGTCAGCTGGATCATTATAAAGAACTTAAGGAGCAAGTAAGAAAGAAAGTAGCTATAATGACTCAACAACTGAAGAAGCTGCAATGGGAACAGAAAGCAGAGAAAGAAAGACTGGCATTGGAGAAGAGGAGGCATGGAGAAGTTCAGGGAAATCTAAAACAAATAAAAGAACAAATAGAAGATCATAAAAAACGAATAGAGAAGTTGGAGGAATACATAAAGACATGCATGGACTTCTTAAATGAGAAAAGACAGCACGAAGAAACCCTGGTAGATGAAATTGGAAAAGCAAAATCAAGAATGTCTGATGTTAATGAAGAATTGAATCGTATTATGAGTGACTTGCAGAATGCTGGAATTGATAAACATGAGGGAAAACGTGAGCAGAAAAGAGCAGAAGTGCTGGAGCATCTTAAAAGACTGTACCCAGATTCCGTGTTTGGAAGGCTGCTTGACCTGTGTCACCCCATTCACAAGAAGTACCAGCTGGCTGTGACTAAACTCTTTGGTCGGTACATGGTTGCCATTGTAGTCACCTCTGAAAAGGTGGCAAAAGACTGTATTCGATTTCTGAAGGAGGAAAGAGCTGAACCTGAGACATTCCTTGCTCTAGATTACCTTGATATAAAACCAATCAATGAAAGACTAAGGGAGATTAAAGGCTGTAAAATGATGATTGATGTCATAAAGACTCAGTTTCCTCAGCTGAAGAAAGTGATTCAATTTGTGTGTGGAAATGGTCTTGTCTGTGAGACTGTGGAAGAAGCCAGACATATTGCATTCGGTGGACCTGAAAGACGGAAAACAGTAGCTCTTGATGGAACACTGTTTTTAAAGTCCGGGGTCATCTCTGGAGGATCAAGTGACTTAAAACACAAGGCTAGATGTTGGGACGAAAAAGAGTTAAAGAATCTAAGAGACCGAAGAAACCAGCTGGTCCAAGAGCTAAAGGATTTAATGAAGATACTCCGCAAGGAAACAGACTTGAAACAAATACAGACTTTAGCACAGGGAACTCATACACGACTCAGATATTCACAGAGTGAAGTGGAGATAATTAAAAAGAAGCACCTTGTTGCTGCTCACAGGGAGCAATCTCAACTACAAAGCGAACTACTAAACATTGAGTCTCAGTGTGCTATGTTGAGTGAAGGGATCAAAGAACAACAACAAAGAATTGAAGGATTTCAAGAAAAGATAAATAAGGTAGAAGATGAAATTTTCCATGACTTCTGTGAAGAAATTGGCCTGGAAAATATTCGTGAATTTGAAAATAAACATGTTAAACAGCAACAAGAAATTGATCAAAAAAGGTTAGAATTTGAAAAACAAAAAACCCGGCTTAATATTCAGCTTGAATATAGTCGCAGTCTGCTCAAGAAGAAACTGAGTAAGATCAACACGTTAAAAGAAACTATCCAGAAAAGTGGCGAAGACATTGACAGCCTGAAGAAGATTGAAGACAACTGTCTGCAAGTCGTGGATGAACTCATGGCAAAGCAGAAGCAACTTAAGGACATATTTGTCACTCAGAATTCCAGCGCTCAGAAAGTTCAATCTCAGCTTGAGGAGGAACGGAAGAAATTTTTGGCTGTTGATAGGGAAGTAGGAAAATTGCAAAAAGAAGTTGTGATCATTCAGACTTCTCTGGAACAGAAACGCCTAGAGAGGCATAACATGCTGCTGGATTGCAAAGTTCAAAATATTGAAATAACTCTTTTGTTGGGGTCACTGGATGACATCATTGAAGTGGAGTTGGGAACTGAGACAGAAAGTACACAGGCAACAACTGATATCTATGAAAAAGAAGCTGCTATGGAAGTGGACTACAGCCCTCTACAGGAGGATTTGAAGGCTCTGCTGTCAGATAAGGAAGTGGAGGCCCGCCTTGTGCTCCTTGTGCAGCAAGTGGCATCCCAGGAAGAAAACTTGCTAAAGACAGCAGCCCCGAACCTGCGAGCCCTACAGAAACTGAAGACAGTCAGGGACAAGTTCCAGGAGTCCACAGATGCTTTTGAGGCCAGCAGAAAGGAAGCCAGGATGTGTAGGCAAGAATTTGAACAGGTGAAAAAAAGGAGATACGATCTTTTCAACCAGTGTTTTGAGCACGTCTCAGTCTCAATTGATCACATCTACAAGAAGCTCTGCCGAAACCACAGTGCCCAAGCATTTCTTAGCCCAGAGAACCCTGAAGAACCTTACTTGGAGGGAATTAGCTACAACTGTGTGGCCCCGGGCAAGCGGTTCATGCCTATGGACAACCTGTCAGGGGGAGAGAGGTGCGTGGCGGCCCTGGCCCTCCTGTTTGCTGTGCACAGCTTCCGGCCTGCTCCATTCTTTGTTCTGGATGAAATAGATGCAGCCCTGGACAATACTAACATCGGCAAAGTCTCCAGTTACATCAGAGAGCAGACTCAAGAACAGTTCCAGATGATAATCATCTCCCTAAAAGAAGAGCTCTATTCCAGAGCCGATGCATTGATAGGCGTCTACCCAGAGCACGACGGAGTCTTGTTCAGCCAAGTGCTGACCCTAGATCTGCGTCCCTACCCAGACAAGGAAGAAGGACAGGGCAGCAGAGGACGCCGAGAGCCCCAGCCCCAGTAG

Related Sequences

XP_004845462.1 Protein

Smc1b PREDICTED: structural maintenance of chromosomes protein 1B [Heterocephalus glaber]

Length: 1237 aa      View alignments
>XP_004845462.1
MGYLKVLLVENFKSWRGRQVIGPFERFTCIIGPNGSGKSNIMDALSFVMGEKITNLRVKSIQELIHGAHVGKPVSSSASVRIVYVEESGEEKTFARIIRGGCSEFYFGDNPVTRSAYIAELEKIGIIGKARNCLVFQGTVELISMKKPKERTRFFEEISTSGELMEEYEEKKRKLQKAEENAQFNFNKKKNAAAERKHAKLEKEEADRYQSLLEELKTNKIQLQLFQLYHNEKKIHFLNVELEHVNRDLSVMKESHFHHENIVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIKAKENTSHHLKKLDISKKSIKDCEKQCSKQEDDIRALQAELVDLDSAWKSFEKQIEEEILHKERGIELEPSQLDHYKELKEQVRKKVAIMTQQLKKLQWEQKAEKERLALEKRRHGEVQGNLKQIKEQIEDHKKRIEKLEEYIKTCMDFLNEKRQHEETLVDEIGKAKSRMSDVNEELNRIMSDLQNAGIDKHEGKREQKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGRYMVAIVVTSEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMMIDVIKTQFPQLKKVIQFVCGNGLVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSDLKHKARCWDEKELKNLRDRRNQLVQELKDLMKILRKETDLKQIQTLAQGTHTRLRYSQSEVEIIKKKHLVAAHREQSQLQSELLNIESQCAMLSEGIKEQQQRIEGFQEKINKVEDEIFHDFCEEIGLENIREFENKHVKQQQEIDQKRLEFEKQKTRLNIQLEYSRSLLKKKLSKINTLKETIQKSGEDIDSLKKIEDNCLQVVDELMAKQKQLKDIFVTQNSSAQKVQSQLEEERKKFLAVDREVGKLQKEVVIIQTSLEQKRLERHNMLLDCKVQNIEITLLLGSLDDIIEVELGTETESTQATTDIYEKEAAMEVDYSPLQEDLKALLSDKEVEARLVLLVQQVASQEENLLKTAAPNLRALQKLKTVRDKFQESTDAFEASRKEARMCRQEFEQVKKRRYDLFNQCFEHVSVSIDHIYKKLCRNHSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGERCVAALALLFAVHSFRPAPFFVLDEIDAALDNTNIGKVSSYIREQTQEQFQMIIISLKEELYSRADALIGVYPEHDGVLFSQVLTLDLRPYPDKEEGQGSRGRREPQPQ