Details from NCBI annotation

Gene Symbol Cdh13
Gene Name cadherin 13, H-cadherin (heart)
Entrez Gene ID 101713905

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CDH13 ENSCPOG00000010591 (Guinea pig)

Gene Details

cadherin 13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009511, Guinea pig)

Protein Percentage 19.14%
CDS Percentage 37.81%
Ka/Ks Ratio 0.11153 (Ka = 1.2469, Ks = 11.1795)

CDH13 ENSG00000140945 (Human)

Gene Details

cadherin 13

External Links

Gene Match (Ensembl Protein ID: ENSP00000268613, Human)

Protein Percentage 82.28%
CDS Percentage 80.18%
Ka/Ks Ratio 0.20002 (Ka = 0.1312, Ks = 0.6558)

Cdh13 ENSMUSG00000031841 (Mouse)

Gene Details

cadherin 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113527, Mouse)

Protein Percentage 81.5%
CDS Percentage 79.53%
Ka/Ks Ratio 0.1614 (Ka = 0.1273, Ks = 0.7888)

Cdh13 ENSRNOG00000014371 (Rat)

Gene Details

cadherin 13 (Cdh13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019298, Rat)

Protein Percentage 81.14%
CDS Percentage 80.04%
Ka/Ks Ratio 0.19181 (Ka = 0.1343, Ks = 0.7001)

Genome Location

Sequence Coding sequence

Length: 1527 bp    Location: 4759667..3788517   Strand: -
>XM_004843218.1
ATGCAGCTGACAACTCCGCTCGTCCTGTGCGTTCTGCTGTCCCAGGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACGCCTGGATTCCAGCAGAAAGTGTTCCATATAAATCAGCCAGCTGAATTCATCGAGGATCAGCCGGTTCTAAACTTGACCTTCAGTGACTGTAAGGGAAATGACAAACTGCGCTATGAGGTCTCAAACCCTTACTTCAAGGTGAACACTGACGGCGGCTTAGTCTCCCTGAGAAACATAACTGCAGTGGGCAAAACTCTGTTCGTCCACGCGCGGACTCCCCACGCAGAAGACATGGCAGAGCTCGTGATTGTCGGGGGAAAGGACATCCAGGGCTCCTTGCAGGATATATTTAAATTTGCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCCCCGATTCTAATTCCAGAGAATCAGAGACAGCCCTTCCCACGAGATGTTGGCAAGGTGGTTGATAGTGACAGACCTGAAGGTTCCAAGTTCAGGCTCACTGGAAAGGGAGTGGACCAGGAGCCTAAAGGAATTCTCAGAATCAACGAGAACACGGGAGTCGTCTCCGTGACCCAGTCCCTGGACAGGGAAACGATTGCTGTTTATCAACTATTTGTGGAGACCACTGATGTCAATGGCAAAACTCTTGAGGGACCGGTGCCTCTGGATGTCATCGTGATTGATCAGAATGACAACAGGCCCATCTTTCGGGAAGGCCCCTACGTCGGCCATGTCATGGAAGGGTCCCCTACAGGGACTACTGTCATGCGGATGACAGCCTTCGACGCAGATGACCCGGCCACGGACAATGCCCTCCTGCGGTATAATATCCGTCAGCAGACGCCTGACAAGCCGTCACCTAACATGTTCTACATCGATCCAGAGAAAGGAGACATTGTCACCGTGGTGTCACCTGCGCTGCTGGACCGGGAGACTCTGGAAAACCCCAAGTATGAGCTGATCATTGAGGCCCAAGATATGGCAGGACTGGACGTTGGGTTAACAGGCACAGCCACTGCCACGGTGGTGATTGATGACAAAAATGACCACTCGCCAAAATTCACCAAGAAAGAGTTTCAAGCCACAGTGGAGGAAGGCACTGTGGGGGTTATCGTCAACTTGACAGTGGAGGACAAGGATGACCCCACCACGGGCGCATGGCGGGCAGCCTACACCATCATCAATGGCAACCCGGGGCAGAGCTTTGAAATCCACACCAACCCACAGACCAACGAGGGAATGCTGTCCGTCGTCAAGGTGACAGAGCAGCCTTTTGCCCTGTGGGAGACTGGAACTAAAACTAGAGTGCCCAGCTCCTTGTGTGGGTTCACCAGCGTCTGGGAGCCCCAAATACACCCGATGCTCCTCGGCCTCTGTGCCAGGGCAGCTCACCTGAGGCTGCCCACCGCACCCAGCTTTTCCCCCAGGACGCACTACGGCAGGGCAACCCCGATTCAGCACCATGGCCAGCAGCCCACTTCCACTGCCCAGGCCCCCTGA

Related Sequences

XP_004843275.1 Protein

Cdh13 PREDICTED: cadherin-13-like [Heterocephalus glaber]

Length: 508 aa      View alignments
>XP_004843275.1
MQLTTPLVLCVLLSQVLLLTSAEDLDCTPGFQQKVFHINQPAEFIEDQPVLNLTFSDCKGNDKLRYEVSNPYFKVNTDGGLVSLRNITAVGKTLFVHARTPHAEDMAELVIVGGKDIQGSLQDIFKFARTSPVPRQKRSIVVSPILIPENQRQPFPRDVGKVVDSDRPEGSKFRLTGKGVDQEPKGILRINENTGVVSVTQSLDRETIAVYQLFVETTDVNGKTLEGPVPLDVIVIDQNDNRPIFREGPYVGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATVVIDDKNDHSPKFTKKEFQATVEEGTVGVIVNLTVEDKDDPTTGAWRAAYTIINGNPGQSFEIHTNPQTNEGMLSVVKVTEQPFALWETGTKTRVPSSLCGFTSVWEPQIHPMLLGLCARAAHLRLPTAPSFSPRTHYGRATPIQHHGQQPTSTAQAP