Details from NCBI annotation

Gene Symbol Herpud1
Gene Name homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, transcript variant X1
Entrez Gene ID 101703450

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HERPUD1 ENSCPOG00000008469 (Guinea pig)

Gene Details

homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007613, Guinea pig)

Protein Percentage 92.03%
CDS Percentage 93.4%
Ka/Ks Ratio 0.28421 (Ka = 0.0422, Ks = 0.1483)

HERPUD1 ENSG00000051108 (Human)

Gene Details

homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000409555, Human)

Protein Percentage 89.26%
CDS Percentage 90.62%
Ka/Ks Ratio 0.22349 (Ka = 0.0551, Ks = 0.2466)

Herpud1 ENSMUSG00000031770 (Mouse)

Gene Details

homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000124201, Mouse)

Protein Percentage 88.24%
CDS Percentage 86.53%
Ka/Ks Ratio 0.1427 (Ka = 0.0653, Ks = 0.4577)

Herpud1 ENSRNOG00000018796 (Rat)

Gene Details

homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 (Herpud1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025559, Rat)

Protein Percentage 87.47%
CDS Percentage 86.19%
Ka/Ks Ratio 0.15039 (Ka = 0.0696, Ks = 0.463)

Genome Location

Sequence Coding sequence

Length: 1176 bp    Location: 29080932..29069851   Strand: -
>XM_004843187.1
ATGGAATCTGAGCCCAACTCGGAGCCGGTCACGCTCCTAGTGAAGAGCCCCAACCAGCGTCACCGCGACTTGGAGCTGAGCGGCGACCGCAGCTGGAGCGTGGGCCACCTCAAGGCCCACCTGAGCCGCGTCTACCCCGAGCGCCCGCGTCCAGAAGATCAGAGGTTAATTTATTCTGGGAAGCTGTTGTCAGATCACCAGTGTCTCAGGGACTTGCTTCCAAAGCAGGAAAAACGACATGTTTTGCATCTGGTGTGCACTGTAAAGATTGCTTCAAAAATGCCAGAAACCAGCACAAAGGTTGCAGAATCCACAGAGCAGCCCCACGGACCTAATCAGGGACAGTATCTTGGGGATTCCTCAAGCGATGGTTTAAGGCAAAGGGAAGTTCTTCAGAACCTTTCTCCCTCTGGATGGGAGAACGTCTCAAGGCCTGAAGCTGTCCCGCAGGCATTCCAAGGTCTGGGGCCTGCTTTCTCTGGCTACACAACCTATGGGTGGCTGCAGCTCTCCTGGTTCCAGCAGATCTATGCACGACAGTACTACATGCAGTATTTAGCTGCCACTGCGACATCAGGAGCTTTTGTCCCACCACCAAGTGCCCAAGAGATACCTGTGGTCTCTACACCTGCTCCAGCCCCTATTCACAACCAGCTTCCTGCTGAAAACCAGCCAGCCAATCAAAATGCAGCACCTCAAGTGGTTGTTAATCCTGGAGCCAATCAGAATTTGCGGATGAATGCTCAAGGTGGCCCTATTGTGGAAGAAGATGATGAGATTAATCGAGATTGGTTGGACTGGACCTATTCAGCAGCTACATTTTCTGTTTTTCTCAGTATCCTCTACTTCTACTCCTCCCTGAGCAGATTCCTCATGGTCATGGGGGCCACCATTGTTATGTACCTGCACCACGTTGGGTGGTTTCCGTTTAGGCAGAGGCCTGTTCAGAACTTCCCCAATGATGTTCCTCCTCAGGAAGCCGTGAATCAGGACCTGAACAACAACTCACAGGAAGGCACTGATTCTGAAGCCGAAGACCCCAACCGCCTCCCCCCAGAGCGGGAAGTCCTGGATGCCGAGCAGACCAGCCCTTCATTTATGAGCACAGCATGGCTTGTCTTCAAGACTTTCTTTGCCTCTCTTCTTCCGGAAGGCCCTCCAGCCATAGCAAACTGA

Related Sequences

XP_004843244.1 Protein

Herpud1 PREDICTED: homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein isoform X1 [Heterocephalus glaber]

Length: 391 aa      View alignments
>XP_004843244.1
MESEPNSEPVTLLVKSPNQRHRDLELSGDRSWSVGHLKAHLSRVYPERPRPEDQRLIYSGKLLSDHQCLRDLLPKQEKRHVLHLVCTVKIASKMPETSTKVAESTEQPHGPNQGQYLGDSSSDGLRQREVLQNLSPSGWENVSRPEAVPQAFQGLGPAFSGYTTYGWLQLSWFQQIYARQYYMQYLAATATSGAFVPPPSAQEIPVVSTPAPAPIHNQLPAENQPANQNAAPQVVVNPGANQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYFYSSLSRFLMVMGATIVMYLHHVGWFPFRQRPVQNFPNDVPPQEAVNQDLNNNSQEGTDSEAEDPNRLPPEREVLDAEQTSPSFMSTAWLVFKTFFASLLPEGPPAIAN