Sequence details NCBI ID: XM_004843160.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Polr2c
Gene Name polymerase (RNA) II (DNA directed) polypeptide C, 33kDa, transcript variant X2
Entrez Gene ID 101725624

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

POLR2C ENSCPOG00000004554 (Guinea pig)

Gene Details

polymerase (RNA) II (DNA directed) polypeptide C, 33kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004104, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 93.94%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.2987)

POLR2C ENSG00000102978 (Human)

Gene Details

polymerase (RNA) II (DNA directed) polypeptide C, 33kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000219252, Human)

Protein Percentage 99.64%
CDS Percentage 92.12%
Ka/Ks Ratio 0.00393 (Ka = 0.0016, Ks = 0.4179)

Polr2c ENSMUSG00000031783 (Mouse)

Gene Details

polymerase (RNA) II (DNA directed) polypeptide C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105147, Mouse)

Protein Percentage 99.64%
CDS Percentage 90.55%
Ka/Ks Ratio 0.00269 (Ka = 0.0016, Ks = 0.5924)

Polr2c ENSRNOG00000015720 (Rat)

Gene Details

polymerase (RNA) II (DNA directed) polypeptide C (Polr2c), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021639, Rat)

Protein Percentage 99.64%
CDS Percentage 90.91%
Ka/Ks Ratio 0.00289 (Ka = 0.0016, Ks = 0.5525)

Genome Location

Sequence Coding sequence

Length: 828 bp    Location: 28613474..28604098   Strand: -
Raw sequence   
>XM_004843160.1
ATGCCGTACGCCAACCAGCCCACTGTGCGGATCACTGAGCTAACCGACGAGAATGTCAAGTTTATCATAGAGAACACGGACCTGGCGGTGGCCAATTCCATTCGGAGGGTCTTCATCGCTGAAGTCCCCATCATAGCCATCGATTGGGTTCAGATTGATGCCAATTCCTCAGTCCTTCATGATGAGTTCATCGCACACAGGCTTGGGTTAATTCCCCTCACTAGTGATGACATTGTGGACAAGCTGCAGTACTCCCGGGACTGCACCTGTGAAGAGTTCTGCCCTGAGTGCTCAGTAGAGTTTACACTCGACGTGCGGTGCAACGAAGACCAGACACGGCATGTCACCTCTCGAGACCTCATTTCCAACAGTCCCCGGGTCATTCCGGTGACATCCCGGAACCGAGACAATGACCCCAATGATTATGTGGAGCAGGACGACATCCTCATTGTCAAGCTGAGAAAGGGGCAGGAGCTGAGGCTTCGAGCCTATGCCAAAAAGGGCTTTGGCAAGGAGCATGCCAAGTGGAACCCAACTGCAGGGGTGGCTTTTGAATATGATCCAGACAATGCCCTGAGGCATACTGTGTACCCCAAGCCTGAGGAATGGCCAAAGAGTGAGTACTCGGAGCTGGATGAGGATGAGTCACAGGCTCCCTATGATCCCAACGGCAAGCCAGAGAGGTTTTACTACAATGTGGAATCCTGTGGCTCTCTGCGCCCTGAAACCATTGTCCTCTCAGCCCTGTCTGGATTGAAGAAGAAGTTGAGTGATTTACAGACTCAGTTAAGCCATGAGATCCAGAGCGATGTATTAACCATAAACTAA

Related Sequences

XP_004843217.1 Protein

Polr2c PREDICTED: DNA-directed RNA polymerase II subunit RPB3 isoform X2 [Heterocephalus glaber]

Length: 275 aa      View alignments
>XP_004843217.1
MPYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTAGVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLRPETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN