Sequence details NCBI ID: XM_004843151.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccdc135
Gene Name coiled-coil domain containing 135, transcript variant X3
Entrez Gene ID 101722741

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC135 ENSCPOG00000023534 (Guinea pig)

Gene Details

coiled-coil domain containing 135

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016074, Guinea pig)

Protein Percentage 90.91%
CDS Percentage 90.87%
Ka/Ks Ratio 0.09659 (Ka = 0.0414, Ks = 0.4291)

CCDC135 ENSG00000159625 (Human)

Gene Details

coiled-coil domain containing 135

External Links

Gene Match (Ensembl Protein ID: ENSP00000353942, Human)

Protein Percentage 83.93%
CDS Percentage 86.68%
Ka/Ks Ratio 0.12372 (Ka = 0.0797, Ks = 0.6442)

Ccdc135 ENSMUSG00000031786 (Mouse)

Gene Details

coiled-coil domain containing 135

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000053972, Mouse)

Protein Percentage 81.17%
CDS Percentage 82.32%
Ka/Ks Ratio 0.1056 (Ka = 0.1046, Ks = 0.9908)

Ccdc135 ENSRNOG00000025860 (Rat)

Gene Details

coiled-coil domain containing 135 (Ccdc135), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000032646, Rat)

Protein Percentage 81.61%
CDS Percentage 82.91%
Ka/Ks Ratio 0.11373 (Ka = 0.1009, Ks = 0.8869)

Genome Location

Sequence Coding sequence

Length: 2619 bp    Location: 28406203..28386638   Strand: -
Raw sequence   
>XM_004843151.1
ATGGAGGTCCTGAAGGAGAAAGTGGAGGAAGAGGAGGCTGCCGAGCGGGAGGAGGCTGCTGAGCGGGCTGAAAGGGTGGAGAAAACGAGGCCAGCGGAGGTGCAGAAGGAAGAAGCCACCCTGACCCAGGAGATGCTCCGAGACCTGGGGAAGCAGCTGTTGGAGATTCAAATGCCCACACCAGCAGAGCCCCCGATCGTAACCAAGGACACCGTTGACATCTCCAACCTGCCCCTTTCCTACAAAACCAACACACTCAAGGAGGAGCACTTGCTGCAGGTGGCCAACAACTTCTCCCGCCAGTACAGCCACCTGTGCCCGGACCGCGTGCCCCTCTTCTTGCAGCCCCTGAATGAGTGTGAAGTGCCTAAGTTTGTGAGCACTACCATCCGGCCCACACTGATGCCCTACCCAGACCTTTATAACTGGGATGGCTGTGCCAACTTTGTCTCCAACTTCCTCACCAGGGTGCCTCTGCCTGACCCCCTCAAGCCGCCCTCGCACCTGTATTCCTCAACCACGGTGCTCAAGCACCAGAAGGGGAACTGCTTCGACTTCAGCACGCTGCTCTGTTCCATGCTGCTTGGTGCTGGCTACGATGCCTACTGCGTCAATGGGTATGGCTCCCAGGCTCTGTGCAACATGGACCTGACTCGGGAGGTCTGCCCACTCACCGTGACACCCAAAGAGACAGTCAAGAAGAAAGAGAAGGCACAGCCCAAGAAGTACACCATCAAACCGCCACGGGACCTGACCAGCAGGTTTGAGCAGGAGCAGGAGATCAAGAAGCAGAAGGAGGCCAAAGCCCAGGAGGAGAAGCGGTGGTGGGAAGAAGAAGAAGAGCACCTTCTGGAGGCAGAGAGGGCGAAGCCTGACCCCCTACATGGCCTTCGGGTGCACTGCTGGGTCCTGGTGCTGTTGGGGAAGCGAGAGGTGCCTGAGAGCTTCTTCATCGACCCTTTCACTGGCCGCAGCTACAGCATCCAGGATGATCACTTCCTGGGCATCGAGAGCCTCTGGAACCACAGGAACTATTGGATCAACATGCAGGACTGCCGGAACTGCTGCAAGGACTTGGTCTTTGACCTGGGAGACTCTGTGAGGTGGGAGTACATGCTCTTGGGGACAGATAAGCCTCATCTGTCCTTGACTGAGGAAGAGGATGAAGGGATGAATGATGACAATGACACAGAAGATCTGGACAAGGAGAACCAGGATAAGAGCTTCGATATGCCGTCCTCATGGGTGGAGCAGATCGACATCTCCCCAGAAGCATTTGAAACCCACTGCCTGAACGGGAAGAAGGTGCTGCATTACAGGAGGGCACAGCTGGAGAAATGGGCCCCGTACCTCAACAGCAATGGCCTGGTGTGCCGCCTCACCACCTACGAAGACCTGGAGTGTACCAAGATTTTGGAGATCAAGGAGTGGTATCAGAACCGGGAGGACATGCTGGAGCTGAAGCACATAAACAACAGCACAAGCCTGCACACTGACTACTTCAGGCCGGGCCACCCCCGGGCTCTGCATGTGCACTCATACAAGTCCATGGAGCCTGAGAATGACCGTGTCATGGAGTTTTATGAAACAGCCCGTGTGGACGGCCTGATAAAATGGGAGGAGACTCCCAGGACAATGACTCAGTACTATCAAGGACGCCCAGACTTCCTCTCCTACCGCCATATCAACTTTGGGCCCAGGTTCAAGAAGCTCACTTTGACCAGCACAGAGTCGAACCCCCGGCCCATACTGAAAATCACAGAGCGGTTCTCCCGAAACCCAGCGAAGCCCGCAGATGAGGATGTGGCAGAGCGTGTGTTCTTGATCTCCGAGGAGCGCATCCAACTGCGCTACCACTGCCGTGATGACTACATCACTGCCTCCAAGCGCGAGTTCCTGCAGCGCTCTGAGGTGGACAGCAAGGGCAACAAGATCATCATGACATCAGACGTGTGCATCAGCTTTGAGGTGGAGCCCATGGAGCACACCAAGAAGCTTCTCTACCAGTACGAGACCATGATGCACCTGAAGAATGAGGAGAAGCTGTCCAAACACCAGGCCTGGGAGTCCGAGCTGGAGGTGCTGGAGATCCTGAAGCTTCGAGAGGAAGAGGAGGAGGCACACATACTGAACATCTCCATCTATGACACCAAGCGCAACGAAAAGAGCAAGGAGTATCGGGAGGCCATGGAGCGTGTGATGCACGAGGAGCACCTGCGGCAGGTGGAGGCCCAGCTGGACTACCTGGCTCCATTCCTGGCCCAGCTGCCCCCGGGTGAGAAGCTGACTCGTGTGCAGGCTGTGCACCTCAAGGATGCGTGCCTCGGTGACTTCAAGCAGCGGCTCATCGACAAGGCCAACCTTATCCAGGCCCGCTTCGAGAAGGAGAACCAGGAGCTGCAGAAGAAGCAGCAGTGGTACCAGGAGAACCAGGTGACCCTGACACCAGAGGATGAAGACTTGTACCTGAGTTACTGCTCTCAGGCCATGTTCCGTATCCGCATCCTGGAGCAGCGGCTCAATCGACACAAGGAGCTGGCCCCCCTGAAGTATTTGGCGTTGGAGGAAAAGCTCTACAAGGATCCACGCCTGGCAGAGTTCCTCAAAGTCTTCGCTTGA

Related Sequences

XP_004843208.1 Protein

Ccdc135 PREDICTED: coiled-coil domain-containing protein lobo homolog isoform X3 [Heterocephalus glaber]

Length: 872 aa      View alignments
>XP_004843208.1
MEVLKEKVEEEEAAEREEAAERAERVEKTRPAEVQKEEATLTQEMLRDLGKQLLEIQMPTPAEPPIVTKDTVDISNLPLSYKTNTLKEEHLLQVANNFSRQYSHLCPDRVPLFLQPLNECEVPKFVSTTIRPTLMPYPDLYNWDGCANFVSNFLTRVPLPDPLKPPSHLYSSTTVLKHQKGNCFDFSTLLCSMLLGAGYDAYCVNGYGSQALCNMDLTREVCPLTVTPKETVKKKEKAQPKKYTIKPPRDLTSRFEQEQEIKKQKEAKAQEEKRWWEEEEEHLLEAERAKPDPLHGLRVHCWVLVLLGKREVPESFFIDPFTGRSYSIQDDHFLGIESLWNHRNYWINMQDCRNCCKDLVFDLGDSVRWEYMLLGTDKPHLSLTEEEDEGMNDDNDTEDLDKENQDKSFDMPSSWVEQIDISPEAFETHCLNGKKVLHYRRAQLEKWAPYLNSNGLVCRLTTYEDLECTKILEIKEWYQNREDMLELKHINNSTSLHTDYFRPGHPRALHVHSYKSMEPENDRVMEFYETARVDGLIKWEETPRTMTQYYQGRPDFLSYRHINFGPRFKKLTLTSTESNPRPILKITERFSRNPAKPADEDVAERVFLISEERIQLRYHCRDDYITASKREFLQRSEVDSKGNKIIMTSDVCISFEVEPMEHTKKLLYQYETMMHLKNEEKLSKHQAWESELEVLEILKLREEEEEAHILNISIYDTKRNEKSKEYREAMERVMHEEHLRQVEAQLDYLAPFLAQLPPGEKLTRVQAVHLKDACLGDFKQRLIDKANLIQARFEKENQELQKKQQWYQENQVTLTPEDEDLYLSYCSQAMFRIRILEQRLNRHKELAPLKYLALEEKLYKDPRLAEFLKVFA