Sequence details NCBI ID: XM_004843117.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cdh8
Gene Name cadherin 8, type 2, transcript variant X3
Entrez Gene ID 101709808

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CDH8 ENSCPOG00000007504 (Guinea pig)

Gene Details

cadherin 8, type 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006772, Guinea pig)

Protein Percentage 98.0%
CDS Percentage 94.99%
Ka/Ks Ratio 0.05077 (Ka = 0.0094, Ks = 0.1857)

CDH8 ENSG00000150394 (Human)

Gene Details

cadherin 8, type 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000462701, Human)

Protein Percentage 98.5%
CDS Percentage 93.78%
Ka/Ks Ratio 0.02612 (Ka = 0.0069, Ks = 0.265)

Cdh8 ENSMUSG00000036510 (Mouse)

Gene Details

cadherin 8

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000117326, Mouse)

Protein Percentage 96.75%
CDS Percentage 91.53%
Ka/Ks Ratio 0.04304 (Ka = 0.0161, Ks = 0.3743)

CDH8 ENSRNOG00000011274 (Rat)

Gene Details

cadherin-8 precursor

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062147, Rat)

Protein Percentage 96.75%
CDS Percentage 91.03%
Ka/Ks Ratio 0.03836 (Ka = 0.0156, Ks = 0.4069)

Genome Location

Sequence Coding sequence

Length: 2400 bp    Location: 24356144..24728222   Strand: +
Raw sequence   
>XM_004843117.1
ATGCCAGAACGGCTAGCAGAAATGCTCTTGGATCTCTGGACTCCATTAATAATATTATGGATTACTCTCCCCCCTTGCATTTACATGGCTCCAATGAATCAGTCTCAAGTTTTAATGAGTGGATCCCCTTTGGAACTAAACAGCCTGAGTGAAGAACAGCGGATTTTGAGCCGCTCCAAAAGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGAAGAATTTTCTGGACCTGAACCGATTCTTGTTGGCCGGCTACACACAGACTTGGACCCTGGAAGCAAAAAAATCAAGTATATCCTATCAGGTGATGGAGCTGGGACAATCTTTCAAATAAACGATATAACTGGAGATATCCATGCTATTAAGAGACTTGACCGAGAGGAAAAGGCTGAATACACCCTGACAGCTCAGGCAGTAGACTGGGAGACGAACAAACCTCTTGAGCCTCCTTCTGAGTTTATTATTAAAGTTCAAGACATCAACGACAATGCACCTGAGTTTCTTAATGGACCCTATCATGCTACTGTGCCAGAGATGTCCATTTTGGGTACGTCTGTCACTAATGTCACAGCTACGGATGCTGACGACCCAGTTTATGGAAACAGTGCAAAGTTGGTTTATAGTATCTTGGAAGGGCAGCCTTATTTTTCCATTGAGCCGGAAACAGCTATTATAAAAACTGCCCTTCCCAACATGGACAGAGAAGCCAAGGAAGAATACCTTGTTGTTATTCAAGCCAAAGATATGGGTGGGCACTCTGGTGGCCTCTCTGGGACCACAACCCTCACAGTGACTCTTAGTGACGTTAACGACAACCCTCCAAAGTTTGCACAGAGTCTGTATCACTTCTCAGTACCAGAAGATGTGATTCTTGGTACTGCAATAGGAAGGGTCAAGGCCAATGACCAGGATATTGGTGAAAATGCTCAGTCATCATATGACATCATTGATGGAGATGGAACAGCACTCTTTGAAATCACTTCTGATGCCCAGGCCCAGGATGGCATCATAAGACTAAGAAAGCCTCTGGACTTTGAGACCAAAAAATCCTATACGTTGAAATTAGAGGCAGCCAATGTCCACACTGACCCACGTTTCAGCAGCAGGGGACCCTTTAAAGATACAGCAACAGTAAAAATTGTTGTTGAAGATGCTGATGAGCCTCCTGTCTTCTCTTCACCAACTTACCTTCTTGAAGTTCATGAAAATGCTGCTCTGAACTCTGTCATTGGGCAAGTGACTGCTCGTGATCCTGACATCACTGCTAGTCCTATAAGGTTTTCCATCGACCGTCACACTGACCTGGAGAGACAATTCAATATTAATGCAGATGATGGAAAGTTAACACTGGCAACTCCACTTGACAGAGAATTAAGTGTGTGGCACAACATAACAATCATTGCAACTGAAATCAGGAACCACAGTCAGATATCACGAGTACCTGTTGCTATTAAAGTCCTGGATGTCAATGACAACGCCCCTGAATTCGCATCCGAATATGAGGCATTTTTATGTGAAAATGGAAAACCCGGCCAAGTCATTCAAACGGTAAGCGCCATGGACAAAGATGAACCCAAAAATGGACATTATTTCTTATACAGTCTTCTTCCTGAAATGGTCAACAATCCAAATTTCACCATCAAGAAAAATGAAGATAATTCTCTCAGCATTTTGGCAAAGCATAATGGATTCAACCGCCAGAAGCAAGAAGTCTATCTTTTACCAATCATAATCAGTGATAGTGGGAATCCTCCACTTAGCAGCACCAGCACTCTAACCATCCGGGTCTGTGGCTGCAGCAATGATGGTGTTGTCCAGTCTTGTAATGTTGAAGCTTATGTCCTTCCCATTGGACTTAGTATGGGCGCCTTAATTGCCATATTAGCGTGCATCATTTTGTTGCTAGTCATTGTGGTGCTGTTTGTAACTCTGAGGAGACACAAAAATGAACCATTGATTATCAAAGATGATGAAGATGTTCGAGAAAACATCATTCGCTATGATGACGAAGGAGGAGGGGAGGAGGACACAGAGGCTTTTGACATTGCAACTTTACAAAACCCAGATGGAATTAATGGATTTTTACCCCGTAAGGATATTAAACCAGATTTGCAGTTTATGCCAAGGCAAGGGCTTGCACCAGTTCCAAATGGTGTTGATGTCGATGAATTTATAAATGTAAGGCTGCATGAGGCAGATAATGACCCCACGGCCCCACCATATGACTCCATTCAAATTTATGGCTATGAAGGCCGAGGGTCTGTGGCTGGCTCTCTCAGCTCCTTGGAGTCCACCACATCAGACTCAGACCAGAATTTTGACTACCTCAGTGACTGGGGTCCCCGCTTTAAGAGACTGGGCGAACTCTACTCTGTTGGTGAAAGTGACAAAGAAACTTGA

Related Sequences

XP_004843174.1 Protein

Cdh8 PREDICTED: cadherin-8-like isoform X3 [Heterocephalus glaber]

Length: 799 aa      View alignments
>XP_004843174.1
MPERLAEMLLDLWTPLIILWITLPPCIYMAPMNQSQVLMSGSPLELNSLSEEQRILSRSKRGWVWNQMFVLEEFSGPEPILVGRLHTDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDWETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLSDVNDNPPKFAQSLYHFSVPEDVILGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGIIRLRKPLDFETKKSYTLKLEAANVHTDPRFSSRGPFKDTATVKIVVEDADEPPVFSSPTYLLEVHENAALNSVIGQVTARDPDITASPIRFSIDRHTDLERQFNINADDGKLTLATPLDRELSVWHNITIIATEIRNHSQISRVPVAIKVLDVNDNAPEFASEYEAFLCENGKPGQVIQTVSAMDKDEPKNGHYFLYSLLPEMVNNPNFTIKKNEDNSLSILAKHNGFNRQKQEVYLLPIIISDSGNPPLSSTSTLTIRVCGCSNDGVVQSCNVEAYVLPIGLSMGALIAILACIILLLVIVVLFVTLRRHKNEPLIIKDDEDVRENIIRYDDEGGGEEDTEAFDIATLQNPDGINGFLPRKDIKPDLQFMPRQGLAPVPNGVDVDEFINVRLHEADNDPTAPPYDSIQIYGYEGRGSVAGSLSSLESTTSDSDQNFDYLSDWGPRFKRLGELYSVGESDKET