Sequence details NCBI ID: XM_004843038.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lrrc36
Gene Name leucine rich repeat containing 36, transcript variant X1
Entrez Gene ID 101713781

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC36 ENSCPOG00000010878 (Guinea pig)

Gene Details

leucine rich repeat containing 36

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009772, Guinea pig)

Protein Percentage 89.44%
CDS Percentage 92.87%
Ka/Ks Ratio 0.41454 (Ka = 0.0544, Ks = 0.1313)

LRRC36 ENSG00000159708 (Human)

Gene Details

leucine rich repeat containing 36

External Links

Gene Match (Ensembl Protein ID: ENSP00000329943, Human)

Protein Percentage 85.22%
CDS Percentage 89.3%
Ka/Ks Ratio 0.35162 (Ka = 0.0794, Ks = 0.2257)

Lrrc36 ENSMUSG00000054320 (Mouse)

Gene Details

leucine rich repeat containing 36

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104979, Mouse)

Protein Percentage 79.68%
CDS Percentage 84.64%
Ka/Ks Ratio 0.37554 (Ka = 0.1231, Ks = 0.3279)

Lrrc36 ENSRNOG00000016854 (Rat)

Gene Details

leucine rich repeat containing 36 (Lrrc36), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022622, Rat)

Protein Percentage 80.08%
CDS Percentage 85.39%
Ka/Ks Ratio 0.37907 (Ka = 0.1166, Ks = 0.3076)

Genome Location

Sequence Coding sequence

Length: 2271 bp    Location: 19004884..18930772   Strand: -
Raw sequence   
>XM_004843038.1
ATGGCGGAGCAATGGGATCTGGACGAGGAGGGCCGCCGCCGCCTGGGGGCGCTGACCCAGGAGCATCCGGAACTGGTGGAGTCTCTTTCATTGCAGGGATCTTATGCTGGAAAAATCCATTCTATTGGTGATGCCTTCAGAAATTTTAAAAATCTCCGATCCTTAGATTTATCAAGAAATTTGATCACTAGCCTAAAGGGCATCCAGTATTTGTGTTCACTGCAACACCTGAATTTATATTATAACAACATTCCTTCATTAGTAGAGGTATCCTGCCTACAGCCTTTGCCCTTTCTCAAAGAACTAGATTTGAGACTCAATCCTGTTGTAAGAAAAGACACAGACTATAGGCTTTTTGCTGTGTACACACTACAAACTCTGGAAAAACTGGATGATCGAACTGTACGTGACAGTGAGAGGAAAGCTGCCAAGCTCCATTTTAGTCAGTTGAGCAACAGTGAAAATTTTCTTTTAGAGGTGGAAAAAAGCTCTAGGGAGAAGATAATGAAAAACTGTGGGACAGGTGAGGGCTGTGCATCAAAAGTCAACACTGATGTTGACACCAGGCCTGAAACAGCCTCAAACAAAGGACTTTTTATACCCTTCACTAACTGGGAAAGAAAGGATTCCCTAACCAGTACTTCTGCAACCCAGGACAATGGTAAACCAGGTCAGAAATCAGACACTTTTCCCCTGGGGACACAGATGCAGGAAATGACAAGAAAGGAGATGCCAAGTGACAACCCCCAGGACAATGAATTCAAACACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACGAGAGATGGGTACCGAGTATCTTTTTTGGATAATAAGTCTTCAGGTTCTTCTCCAGAAAAGGACTTGATACCAAAGCTCGATACTTATCATCTTACCCATGATGCCTCATTGGGTAAATGCCTGGATGTAGGTGATTCCAACCAGATCCATCCCTATCAGTTACCTTCTGGCATCAGTTTGGAAAATTATAATAGTCATAATTCTCAAATTCTATCCCTGCATGGAAATCTTGGTAAAAGGCCTCAGAGAAACAAGAACTACCAAGAATATAGCACAAAGCCTTTAAATGACATAAAGGCTACTACATCCCATTCCTGTGGAGATTTATTGACTTCTCTGTCAAACTCTGACTCCAGTACTGGAAGACTTTTGAAACTTAGTTCAGATCTGTATGCCACAACTCATTTCAACAGTGACCCTGCTCTGCTGGCCAATGTAGAACAACAGTTATCCAGCAACCTTGGTGATTTAACACCAGCACATGGTTCTTTACCAAACAACTCTGTCCTGGGAAACTCTCTTCAGACATTGCGGTTGCCTCCTGGGACTTCAGAAGACAGAGAGATTCTGACCAAGAGGTCATTAAGCCCATCGAGGAGAGGATTCAAGCGGAAGGACAATATCCTTGCCAATCTGAATCTAAAGCACGGTTTCCGAGATGGTATAGGCAGCGAGCCTCTCTGTAGTGACCTGGGCAGTTTGCATGGTTTGCCAGGAAACCACAGTCCCCCGATCTCTGCCAGAACCCCCCATGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAGTGACTCTGGCTCCCTGCTCCTCAACAAGAAGTTCCTCGGTCCTGCACAAGATTTGCTTCTGTCTTTGGTTGTCCCTGCTCCTCTGCAGCAGCGATGTCGCCCACATCCTGAAGACACTCCAAAAACTTTCCACAGGAGGGAGAGTGACCTGAAGGAGGCTGAGCAGCCCATCCCTAATGACATGGAAAGTTTAAAGCAAAAACTGGTCAGAGTGCTGGAGGAAAACCTCATTTTGTCAGAAAAAGTTCAGCAGTTGGAGGAAGGTGCAGCCACCTCAATTATGAGTGGGCACCAGTCCCATACTTACGATGATATTCTACACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAAAAAGGTGGAGGAGACGATTGCCCTTCTTCATGAAAGTCAGAGATCCCTGGTGTTAACTAATGAGTATCTGCTGCAGCTGCTGAATAAAGAGCAAAAAGGTTATTCTGGGAAAGCACTCCTGCCCCCTGAGAAGAGTCATCATTTGGGGAGATCGTCGCCCTTTGGGAAAAGCACTCTGTCTTCCTCCTCACCAGTGGCACACGACACGGGTCAGTATCTAATACAGAGTGTCTCAGAAGCTGCCCCAGAGCCTAGTTTGTGGAGCTACCATTGA

Related Sequences

XP_004843095.1 Protein

Lrrc36 PREDICTED: leucine-rich repeat-containing protein 36 isoform X1 [Heterocephalus glaber]

Length: 756 aa      View alignments
>XP_004843095.1
MAEQWDLDEEGRRRLGALTQEHPELVESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRNLITSLKGIQYLCSLQHLNLYYNNIPSLVEVSCLQPLPFLKELDLRLNPVVRKDTDYRLFAVYTLQTLEKLDDRTVRDSERKAAKLHFSQLSNSENFLLEVEKSSREKIMKNCGTGEGCASKVNTDVDTRPETASNKGLFIPFTNWERKDSLTSTSATQDNGKPGQKSDTFPLGTQMQEMTRKEMPSDNPQDNEFKHYSPRQSTVRSPEKMTRDGYRVSFLDNKSSGSSPEKDLIPKLDTYHLTHDASLGKCLDVGDSNQIHPYQLPSGISLENYNSHNSQILSLHGNLGKRPQRNKNYQEYSTKPLNDIKATTSHSCGDLLTSLSNSDSSTGRLLKLSSDLYATTHFNSDPALLANVEQQLSSNLGDLTPAHGSLPNNSVLGNSLQTLRLPPGTSEDREILTKRSLSPSRRGFKRKDNILANLNLKHGFRDGIGSEPLCSDLGSLHGLPGNHSPPISARTPHVATVLRQLLELVDKHWSDSGSLLLNKKFLGPAQDLLLSLVVPAPLQQRCRPHPEDTPKTFHRRESDLKEAEQPIPNDMESLKQKLVRVLEENLILSEKVQQLEEGAATSIMSGHQSHTYDDILHKNQQLTMQVACLNQELAQLKKVEETIALLHESQRSLVLTNEYLLQLLNKEQKGYSGKALLPPEKSHHLGRSSPFGKSTLSSSSPVAHDTGQYLIQSVSEAAPEPSLWSYH