| Gene Symbol | unclassified transcription discrepancy |
|---|---|
| Gene Name | mRNA |
| Entrez Gene ID | 101708616 |
For more information consult the page for NW_004624746.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing
| Protein Percentage | 91.36% |
|---|---|
| CDS Percentage | 91.62% |
| Ka/Ks Ratio | 0.24036 (Ka = 0.0487, Ks = 0.2025) |
RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing
| Protein Percentage | 87.93% |
|---|---|
| CDS Percentage | 87.67% |
| Ka/Ks Ratio | 0.20228 (Ka = 0.0713, Ks = 0.3524) |
RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing
| Protein Percentage | 85.75% |
|---|---|
| CDS Percentage | 84.58% |
| Ka/Ks Ratio | 0.22225 (Ka = 0.0957, Ks = 0.4307) |
| Protein Percentage | 82.93% |
|---|---|
| CDS Percentage | 81.6% |
| Ka/Ks Ratio | 0.19655 (Ka = 0.1128, Ks = 0.5742) |
>XM_004843023.1 ATGGCCCAGACCCCCGACAGCATCTCCTGTGAGCTTCGAGGCGAGATCACCAGGTTCCTGTGGCCAAAGGAGGCAGAGCTGCTCCTAAAAACCTGGCTTCCCCAGGAAGGTTCTGAGCGAAGTCACATTCTGGCGCTGCTGCGATGGAGGGCCTACCTGCTACATACTTGCCTCCCACTGAGGGTGGATTGCACTTTCAGCTACCTAGAGGTCCAGGCCATGGCACTGCAGGAGACACCCCCTCAGGTTACCTTTGAGCTGGAGTCCCTGCCTGAGCTGGTCCTAGAATTTCCTGGTGTGGCCACCGTAGAACAGCTGGCCCAGCATGTGGCTTCAGCCATCAAGAAGGTCTTCCCTCGCTCAACCCTTGGGAAGCTATTCCGGAAGCCCACACCCACCTCAATGCTGGCTCGGCTAGAGAGAAGTAACCCCTCAGAGTCCATGGCCCCCAGGAGCCCCTGTGGTGGCTTCTTGGAGACATATGAGGCTCTGTGTGACTACAATGGCTTCCCTTTCCGAGAAGAGATTCAGTGGGAAGTGGACACCATCTATCATCGTCAAGGATGCCGCCAGTTCAGCCTAGGAGATTTCAGTCACCTTGGCAGCCGGGACCTGGCCTTGAGTGTGGCTGCCCTGTCCTACAACCTGTGGTTCCGGTGCCTCTCTTGTGTGGACATGAAGCTGAGCCTTGAGGTCTCAGAACAGATTCTACACATGATGGGTCAGTCATCCCACCTGGAAGAGCTAGTGCTGGAGACCTGTGGCTTGAGAGGAGACTTTGTCCGTCGACTGGCCCAGGCACTGGCAGGACATTCGAGCTCTGGGCTTCGAGAACTCAGCTTGGCGGGGAACCTGGTGGATGATAGAGGCATGGCTGCACTCAGCAGGCACTTAGAGCATCGTCCAGGAGCCCTCAGGAGACTCAACCTAGCGCAGACAGGATTGACACCTCGAGGAATGAGGGCTCTGGGCCAGGCACTGGCCACCAATGCTGCCTTTGACTCTGCCCTGACCCATCTGGACCTTTCTTGTAATCCTGGGGCACTAGGGGCCTCAGAGGACAATGGAGGCCTCTATAGTTTCCTGAGTCGTCCTAACGCTTTGATGTTCCTGAATCTCGCAGGCACAGACGCTGCCCTGGATACTGTGAGGGGTGTTCATGCGGGGATGATCAGCCGGGCTCGGAAGCTCAGCTGGGTTGATTGGAGGGCAGAGTGGGGTCAGGGATGGCTTGGTCCCCCCCCCCCCCCCCCGCTGCCACATGTAGCCAACACCTTCCTCCTGCAGCTCTTCACAGCGCTGTCGAGCGGCTGCTGTTCCAGCCTCACCTACCTTGACACTTCCAGGAATGTCTTCTCTCGCTGCAAGTCCCCGGCTGCCGCTGCATCGCTGCAGCTCTTCCTTAGCCGTGCAGAGACCTTGCGGCACCTGGGCCTGGCGGGCTGCAAACTGCCACCGGAAGCGCTCAGGGCCGTTTTGGATGGCCTGGCGCTCAACACACACATCCGAGACCTGCACCTGGACCTCAGCGCTTGTGAGCTGCGCTCTGCGGGTGCCCAGGTGATACAAGACTTAGTGTGCGATGCAGGCGTCGTGAGCTCCTTGGATCTGGAGGATAATGGCTTTGGCTCAGACATGGTGACTCTGGTGCTGGCCATCGGGAGGAGCCAGTCGCTGAGACATGTAGCACTTGGAAGAAACTTCAACGTCCGGTGCAAGGAGACCCTGGATGACGTCCTGCACCGGATCGTCCAGCTCATGCAAGACGACGACTGTCCCCTGCAGTCTCTGTCCGTGGCTGATTCGCGGCTAAAGCTGGGCGCCGGCGTCCTACTCCGGGCACTGAGCACCAATCCTAACCTGACTGCACTGGATATCAGTGGCAACGCCATGGGGGACACGGGCGCCAAGATGCTGGCCAAGGCCCTGGGAGTCAACACGAGGCTCCGGTCTGTGATTTGGGATCGGAACCACACATCTGCTCTGGGGCTGCTGGACGTGGCGCAGGCCCTGGAGCAGAACCATAGCTTAAAGGACATGCCTCTGCCACTGAACGATGTGGTCCAGGCCCAGCGTAGCCGCCCAGAACTGACAGCACGAGCAGTCCATCAGATCCAAGCCTGTCTCTTGAGGAATAACCATGAGGATCCCACCTCTTCTGGCCCCTCATCTTGCCTTCAGCCTTTGAATTTGGTTTCAGATCACTCAGAGCAGGAGGTGAATGAGCTGTGTCAGTCGGTGCAGGAGCACATGGAGCTGCTGGGCTGTGGGGCTGGACCCCAGGGTGAAGCTGCTGTGCACCAAGCAGAGGATGCCATCCAAAATGCCAACTTTTTTCTCAGCATTCTCCCCATTCTAAATGAGGCTGGGAACTCCCCAAGCTATCAATGGCAGCTGCGGCAGAAGGTGGAGGCCCTCCTGGAACAGGTGGGTGAGGTCTGCCGCCAGGACACCCAGGACTTCATTCAGGCCATACTGGACACAACAAGGAGCCTCTGCCGACAGATGCTGCAGGGACCTGGCTGGAGGGAGCAGCTAGAAGGGGTCCTGGTGGGTTCAGAGGGCCTCCCAGAGCTGCTCCCAGAGCAGCTACTGCAAGATGTCTTCACCAGACTCAGGGACATTCGGCTGTCAGTCACTGGGACCCTTTCAGAGAACATTGTGGCTCAGGCTCTGGCAGGCCTGAGTGCAGCCCAGGATCGGCTGGTGGAGAGTCTGGCTCAGCAGGCACCAGTGGCAATGCCCCCTAGCCTCCCAGCACTGGATGGAGGTGAGCTCAGCCCCCTAGGGCCTGGGGCATTGGAAGGTTTTTTCTTCCCTGAGGACAAGGAAGAGGAAGAGGAAAAGGAGAACGATGAAAGTCCTCTGTGGAAATGGCCTGAGCACTGTCTTCACCTGGTCCCCTTCGATTACAGTGCTGCTGAGCAAGCGGAACCGGAGCCCGAGCTGGCGGCTCCGGGGGAAGATGCTGAGCCGCAGGCGGGGCCGTCCGCTCGCGGCTCTCCGAGCCCCGCCGCTCCCGGGCCACCAGGCGGCCCACTGCCTCGCATGGACCTGCCGCCCGCCGGGCAGCCCTTGCGCCATCCAACCCGGGCGCGGCCACGGCCACGCCGCCAACACCACCACCGCCCGCCGCCGGGGGGCCCCCAGGTGCCCCCAGCCCTGCCGCAGGAAGGGAATGGGCTCAGTGCCCGAGTGGACGAGGGCGTGGAGGAATTCTTCTCCAAAAGGCTGATCCAGCAGGATTGCCTTTGGGCCCCTGAGGAGGACCCAGCCACCGAAGGGGGTGCCACTCCTGTCCCCCGTACACTTCGAAAGAAGTTGGGCACCCTCTTTGCCTTTAAGAAGCCTCGTTCAACACGGGGTCCACGGCCTGATTTAGAGACCAGCCCTGGTGCAGCTGCCCGCACCCGGAAAACCACTCTTGGGGACCTGCTGCGGCCTCCAGCCCGTCCTGGCCGTGGTGAGGAGCCTGGTGGGACCGAGGGGGGCCCCAGCAGCCCTGACCCTGCCCGAAGAAGCAGGCCTCGGTACACACGGGAAAGCAAGGCCTACTCAATGATACTGCTGCCTGCTGAGGAGGAGACACTGAATGCCAGACCTGATAAGCGGCGGCCCCTGGAGCGGGGAGACACAGAGCTGACCCCGTCCTTTGAACAGCGGGTACAAGTTATGCTGCAGAGGATCGGTGTGAGCCGGGGCAGTGGGGGTGCCGAGGGCAAGAGGAAGCAAAGTAAAGATGGTGAAATCAAGAAAGCTGGCTCAGATGGTGACATAATGGACAGCTCCACGGAGACCCCTCCCATCTCAATCAAGTCCCGAACTCACTCCGTGTCTGCTGACCCCTCATGCAGACCTGGCCCAGGGGTCCAGGGGCCTGAGTCTGCCACCTGGAAGACACTGGGACAGCAGTTGAATGCAGAGCTCAGAGGCCGTGGTTGGGGCCAACAGGATGGTCCAGGCCCCCCCTCCTCACCTTGTCCCAGCCCAAACTTCCGCAGAGCCAGCCCTGCCCCAGACAGCCTGGGCCTTCCAGAGGACCCTTGCTTGGGCCCCAGGAATGAAGATGGCCAGCTGAGGCCAAGGCCTCTCTCGGCAGGCCGACGAGCAGTGTCTGTGCATGAGGACCAGCTCCAGGGCCCTGCTGAACGGCCCCTGCGGCTGCAGCGGTCCCCAGTCCTCAAGCGTAGACCGAAGCTCGAGGCACCCCCATCCCCAAGCCTAGGATCTGGCCTTGGAACCGAGCCTCTGCCCCCACAGCCCACAGAGCCCTCCAGCCCTGAGCAGAGCCCACCCTCCCCAGCCACAGACCAAAGAGGCGGCGGTCCCAACCTCTGA
unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 16C [Heterocephalus glaber]
Length: 1445 aa View alignments>XP_004843080.1 MAQTPDSISCELRGEITRFLWPKEAELLLKTWLPQEGSERSHILALLRWRAYLLHTCLPLRVDCTFSYLEVQAMALQETPPQVTFELESLPELVLEFPGVATVEQLAQHVASAIKKVFPRSTLGKLFRKPTPTSMLARLERSNPSESMAPRSPCGGFLETYEALCDYNGFPFREEIQWEVDTIYHRQGCRQFSLGDFSHLGSRDLALSVAALSYNLWFRCLSCVDMKLSLEVSEQILHMMGQSSHLEELVLETCGLRGDFVRRLAQALAGHSSSGLRELSLAGNLVDDRGMAALSRHLEHRPGALRRLNLAQTGLTPRGMRALGQALATNAAFDSALTHLDLSCNPGALGASEDNGGLYSFLSRPNALMFLNLAGTDAALDTVRGVHAGMISRARKLSWVDWRAEWGQGWLGPPPPPPLPHVANTFLLQLFTALSSGCCSSLTYLDTSRNVFSRCKSPAAAASLQLFLSRAETLRHLGLAGCKLPPEALRAVLDGLALNTHIRDLHLDLSACELRSAGAQVIQDLVCDAGVVSSLDLEDNGFGSDMVTLVLAIGRSQSLRHVALGRNFNVRCKETLDDVLHRIVQLMQDDDCPLQSLSVADSRLKLGAGVLLRALSTNPNLTALDISGNAMGDTGAKMLAKALGVNTRLRSVIWDRNHTSALGLLDVAQALEQNHSLKDMPLPLNDVVQAQRSRPELTARAVHQIQACLLRNNHEDPTSSGPSSCLQPLNLVSDHSEQEVNELCQSVQEHMELLGCGAGPQGEAAVHQAEDAIQNANFFLSILPILNEAGNSPSYQWQLRQKVEALLEQVGEVCRQDTQDFIQAILDTTRSLCRQMLQGPGWREQLEGVLVGSEGLPELLPEQLLQDVFTRLRDIRLSVTGTLSENIVAQALAGLSAAQDRLVESLAQQAPVAMPPSLPALDGGELSPLGPGALEGFFFPEDKEEEEEKENDESPLWKWPEHCLHLVPFDYSAAEQAEPEPELAAPGEDAEPQAGPSARGSPSPAAPGPPGGPLPRMDLPPAGQPLRHPTRARPRPRRQHHHRPPPGGPQVPPALPQEGNGLSARVDEGVEEFFSKRLIQQDCLWAPEEDPATEGGATPVPRTLRKKLGTLFAFKKPRSTRGPRPDLETSPGAAARTRKTTLGDLLRPPARPGRGEEPGGTEGGPSSPDPARRSRPRYTRESKAYSMILLPAEEETLNARPDKRRPLERGDTELTPSFEQRVQVMLQRIGVSRGSGGAEGKRKQSKDGEIKKAGSDGDIMDSSTETPPISIKSRTHSVSADPSCRPGPGVQGPESATWKTLGQQLNAELRGRGWGQQDGPGPPSSPCPSPNFRRASPAPDSLGLPEDPCLGPRNEDGQLRPRPLSAGRRAVSVHEDQLQGPAERPLRLQRSPVLKRRPKLEAPPSPSLGSGLGTEPLPPQPTEPSSPEQSPPSPATDQRGGGPNL