Sequence details NCBI ID: XM_004842999.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Psmb10
Gene Name proteasome (prosome, macropain) subunit, beta type, 10
Entrez Gene ID 101701334

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMB10 ENSCPOG00000021270 (Guinea pig)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 10

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020806, Guinea pig)

Protein Percentage 88.28%
CDS Percentage 88.16%
Ka/Ks Ratio 0.20904 (Ka = 0.0689, Ks = 0.3298)

PSMB10 ENSG00000205220 (Human)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 10

External Links

Gene Match (Ensembl Protein ID: ENSP00000351314, Human)

Protein Percentage 84.62%
CDS Percentage 84.25%
Ka/Ks Ratio 0.13578 (Ka = 0.0832, Ks = 0.6131)

Psmb10 ENSMUSG00000031897 (Mouse)

Gene Details

proteasome (prosome, macropain) subunit, beta type 10

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034369, Mouse)

Protein Percentage 80.95%
CDS Percentage 80.34%
Ka/Ks Ratio 0.14809 (Ka = 0.1098, Ks = 0.7418)

Psmb10 ENSRNOG00000019494 (Rat)

Gene Details

proteasome (prosome, macropain) subunit, beta type 10 (Psmb10), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026462, Rat)

Protein Percentage 81.32%
CDS Percentage 80.22%
Ka/Ks Ratio 0.13707 (Ka = 0.1057, Ks = 0.7712)

Genome Location

Sequence Coding sequence

Length: 822 bp    Location: 18442476..18445731   Strand: +
Raw sequence   
>XM_004842999.1
ATGCTGAAGCCTGCGCTGGCGCCCCAAGGGGGCTTCTGCTTCGAGAGCTGTCAGAGAAATGCATCCTTGGAACGCGCCTTTCCGGGGCTCCGGGCCCCTCATGCACGCAAGACTGGGACCACTATTGCGGGCCTGGTGTTCCGAGACGGTGTCATCCTGGGAGCAGATACGCGCGCCACTGACGATATGGTCGTAGCAGACAAGAACTGCGAGAAGATTCACTACATCGCCCCCAAAATCTACTGTTGTGGGGCTGGAGTAGCCGCGGATGCTGAGATGACCACGCGGATGGCGTCGTCTAACATGGAGCTACACGCACTGTCCACGGGCCGCGAGCCTCGCGTAGCCACGGTCACCCGCATCCTCCGCCAGACTCTGTTCCGGTTCCAAGGCCACGTGGCAGCGTCCCTGATTGTGGGTGGCATAGACCCGATGGGACCGCAGCTGTATGGCTTGCATCCCCACGGGTCCTACACCCGCCTGCCCTTCACGGCGCAGGGATCTGGGCAGGATGCGGCCCTGGCTGTGCTGGAGGACCGGTTCCGGCCTAACATGACACTGGAGGCTGCGCAGGGGCTGCTGGTGGAAGCCATCACCGCAGGGATCCTGGGTGACCTAGGTTCTGGGGGCAGCGTAGATGCATGTGTGATCACTGCAATGGGCTCCAAGCTGCTTCGGACTCTGAGCTCACCTACAGACCCTGTGGAGAGGCTTGGCCATTACCGATTGTCACCTGGAACCACAGCAATCCTGACCCAGATGGTGAAGCCACTGAACCTGGACCTCCTGGAGGAAACTGTTCAGGCCATGGAGGTGGAGTGA

Related Sequences

XP_004843056.1 Protein

Psmb10 PREDICTED: proteasome subunit beta type-10 [Heterocephalus glaber]

Length: 273 aa      View alignments
>XP_004843056.1
MLKPALAPQGGFCFESCQRNASLERAFPGLRAPHARKTGTTIAGLVFRDGVILGADTRATDDMVVADKNCEKIHYIAPKIYCCGAGVAADAEMTTRMASSNMELHALSTGREPRVATVTRILRQTLFRFQGHVAASLIVGGIDPMGPQLYGLHPHGSYTRLPFTAQGSGQDAALAVLEDRFRPNMTLEAAQGLLVEAITAGILGDLGSGGSVDACVITAMGSKLLRTLSSPTDPVERLGHYRLSPGTTAILTQMVKPLNLDLLEETVQAMEVE