Details from NCBI annotation

Gene Symbol Lcat
Gene Name lecithin-cholesterol acyltransferase
Entrez Gene ID 101700977

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LCAT ENSCPOG00000024823 (Guinea pig)

Gene Details

lecithin-cholesterol acyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018146, Guinea pig)

Protein Percentage 96.24%
CDS Percentage 93.74%
Ka/Ks Ratio 0.09243 (Ka = 0.02, Ks = 0.2161)

LCAT ENSG00000213398 (Human)

Gene Details

lecithin-cholesterol acyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSP00000264005, Human)

Protein Percentage 90.64%
CDS Percentage 88.51%
Ka/Ks Ratio 0.10175 (Ka = 0.0479, Ks = 0.4711)

Lcat ENSMUSG00000035237 (Mouse)

Gene Details

lecithin cholesterol acyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038232, Mouse)

Protein Percentage 84.17%
CDS Percentage 85.17%
Ka/Ks Ratio 0.19037 (Ka = 0.0906, Ks = 0.4762)

Lcat ENSRNOG00000019573 (Rat)

Gene Details

lecithin cholesterol acyltransferase (Lcat), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026583, Rat)

Protein Percentage 85.84%
CDS Percentage 86.45%
Ka/Ks Ratio 0.19283 (Ka = 0.08, Ks = 0.4147)

Genome Location

Sequence Coding sequence

Length: 1317 bp    Location: 18438435..18441650   Strand: +
>XM_004842998.1
ATGGGGCCGCCCGGCTCCCCATGGCAATGGGTGCTGCTGCTACTGCTGCTCCCCCCTGCTTCCCCTTTCTGGCTCCTCAATGTGCTCTTCCCCCCGCACACCACGCCTAAGGCTGAACTCAGTAACCACACACGGCCAGTCATCCTCGTGCCTGGCTGCCTGGGGAATCAGCTAGAAGCCAAGCTGGATAAACCGGATGTGGTGAACTGGATGTGCTACCGCAAGACAGAGGACTTCTTTACCATCTGGCTGGATCTCAATATGTTTCTACCCTTTGGGGTGGACTGCTGGATTGATAATACCAGGGTTGTCTACAACCGAAGTTCTGGACGTGTGTCTAATGCCCCTGGTGTAGAGATCCGTGTCCCTGGCTTTGGCAAGACCTACTCTGTTGAGTACTTGGACAGCAACAAGCTAGCAGGTTACATGCACACCCTGGTACAGAATCTGGTCAACAATGGGTATGTGCGGGATGAGACAGTGCGGGCTGCCCCCTATGACTGGCGCCTGGAGCCCAGCCAGCAGGAGGAGTACTACCAGAAGCTGGCCAGGCTCGTGGAGGAGATGTATGCTGCTTATGGGAAGCCTGTCTTCCTCATTGGGCACAGCCTTGGCTGCCTTCAATTACTCTATTTTTTGCTGCGTCAGCCCCAGTCATGGAAGGACCACTTCATTGATGGCTTCATCTCACTTGGGGCTCCCTGGGGCGGTTCTACCAAGCCAATGCTGGTTTTGGCCACAGGTAACAACCAAGGCATCCCGCTCATGTCCAGCATCAAGCTGAGAGAGGAACAGCGAATAACGACGACTTCCCCCTGGATGTTTCCCTCCTACCAGGTGTGGCCTGAGGGCCATGTGTTCATTTCCACACCAAGCTTCAACTACACAGGCCGTGACTTCCAGCGCTTCTTTGCTGACCTGCATTTTGAGGATGGCTGGTACATGTGGCTACAGTCACGTGACCTGCTGGCAGGCCTCCCAGCACCTGGTGTGGAAGTATACTGTCTATACGGTGTGGGGCTATCTACCCCCAGCACCTACATCTATGACCACGGCTTCCCCTACTCAGACCCCGTGAATGTGATTTATGAAGACGGTGATGACACAGTGGCCACACGCAGCAGTGAGCTCTGTGGCCTCTGGCAGGGCCGCCAACCACAGTCTGTATACTTGCTGCCCATGAATGGGACACAGCACCTCAATATGGTGTTCAGCAACCAGACACTGGAGTACATCAATGCCATCCTACTGGGTGCCTACCGCCAGGGCACCCCTGCACCCCCAACTGCCAGCCCAGGGCCCCTGCCCCCTGAATAA

Related Sequences

XP_004843055.1 Protein

Lcat PREDICTED: phosphatidylcholine-sterol acyltransferase [Heterocephalus glaber]

Length: 438 aa      View alignments
>XP_004843055.1
MGPPGSPWQWVLLLLLLPPASPFWLLNVLFPPHTTPKAELSNHTRPVILVPGCLGNQLEAKLDKPDVVNWMCYRKTEDFFTIWLDLNMFLPFGVDCWIDNTRVVYNRSSGRVSNAPGVEIRVPGFGKTYSVEYLDSNKLAGYMHTLVQNLVNNGYVRDETVRAAPYDWRLEPSQQEEYYQKLARLVEEMYAAYGKPVFLIGHSLGCLQLLYFLLRQPQSWKDHFIDGFISLGAPWGGSTKPMLVLATGNNQGIPLMSSIKLREEQRITTTSPWMFPSYQVWPEGHVFISTPSFNYTGRDFQRFFADLHFEDGWYMWLQSRDLLAGLPAPGVEVYCLYGVGLSTPSTYIYDHGFPYSDPVNVIYEDGDDTVATRSSELCGLWQGRQPQSVYLLPMNGTQHLNMVFSNQTLEYINAILLGAYRQGTPAPPTASPGPLPPE