Details from NCBI annotation

Gene Symbol Cdh1
Gene Name cadherin 1, type 1, E-cadherin (epithelial)
Entrez Gene ID 101719565

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CDH1 ENSCPOG00000012100 (Guinea pig)

Gene Details

cadherin 1, type 1, E-cadherin (epithelial)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010882, Guinea pig)

Protein Percentage 89.84%
CDS Percentage 90.29%
Ka/Ks Ratio 0.20476 (Ka = 0.055, Ks = 0.2685)

CDH1 ENSG00000039068 (Human)

Gene Details

cadherin 1, type 1, E-cadherin (epithelial)

External Links

Gene Match (Ensembl Protein ID: ENSP00000261769, Human)

Protein Percentage 83.86%
CDS Percentage 84.77%
Ka/Ks Ratio 0.22489 (Ka = 0.0982, Ks = 0.4365)

Cdh1 ENSMUSG00000000303 (Mouse)

Gene Details

cadherin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000000312, Mouse)

Protein Percentage 82.29%
CDS Percentage 80.74%
Ka/Ks Ratio 0.15907 (Ka = 0.1148, Ks = 0.7218)

Cdh1 ENSRNOG00000020151 (Rat)

Gene Details

cadherin 1 (Cdh1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027346, Rat)

Protein Percentage 82.86%
CDS Percentage 81.08%
Ka/Ks Ratio 0.15785 (Ka = 0.1112, Ks = 0.7046)

Genome Location

Sequence Coding sequence

Length: 2685 bp    Location: 17557682..17483261   Strand: -
>XM_004842961.1
ATGGGCCCCTCGTGCCGCAGCCTCTCCGCGCTCCTGCTACTGCTGCAGGTTTCGTCCTGGCTCTGCCAGGAGGTGGAGGAGCCCTGCCAGCCCGGCTTTGGCGCAGAGAGCTACACGTTTACCGTCCCCTGGCACCTAGAGAGAGGCCGCGCCCTGGGCAGAGTGAGTTTTGAAGGATGCACGGGTCGACCAAGAACAGCCTACTTTTCTACCGACTCCCGATTCAAAGTAGGTACAGATGGTGTAGTCAGAGTCAAATGGCCTCTTCTGTTTCATAAACCAGAGATCAGTTTTTCTGTCCACGCCTTGGAATTCACCTTCAGAAAGTTTTCCACCAAAGTTACGCTGAAGGCAGAGGGACCCCATCCTCAGCACCACAACCACCATCAGCGCCGGGACAATCACCACCACCAGGACCCTGACCAGGACATTTCCCCAGGATCCCAGATAGAAGTGATCAAATTTCCCAACTTCCACCATGGTCTCAGAAGGCAGAAGAGAGACTGGGTTATCCCTCCCATCAGCTGCTCAGAAAATGAAAAAGGCCCATTTCCTAAAAGGCTGGTTCAGATCAAATCCAACAGGGACAAAGAAACTAAGGTTTTCTACAGCATCACTGGCCAAGGAGCTGATACACCCCCTGTTGGTGTGTTTATTATTGAAAGAGAAACAGGATGGCTGATGGTGACAGAGCCTCTGGATAGAGAAAAAATTGCCAACTACACTCTCTTTTCTCATGCTGTGTCATCGAATGGGAATGCAGTTGAGGATCCCATGGAGATTGTTATCACAGTGACAGATCAGAATGACAACAGGCCTCAGTTCATCAAAGAGGTCTTTGAGGGATCTGTCATGGAAGGTGCTCTTCCAGGAACCTCTGTGATGCAGGTCTCAGCCACTGACGCAGATGATCCTAACACCTACAACGCTGAGATCGCTTATGCCATCCTCAGCCAAGAGCCTACATTGCCTCACAGCCAAATGTTTACCATCAATCGGATCACAGGGGTCATCAGCGTGGTCACCACCGGGCTGGACAGAGAGAGTTATCCCACATATACCCTGGAGGTTCAGGCTGCTGACCTTCAAGGTGAAGGTTTAAGCACAACAGCAAAAGCCGTGATCACGGTGACTGACGTCAACGATAATCCTCCCATCTTCAACCCAACCACGTATGAGGGTCAGGTTCCTGAGAATGAGCCCGAAGCCGTCATCACTACGCTCACGGTGACTGATGATGATGCCCCCAATACCCCAGCATGGCAGGCCGTGTACAGCATACTAAATGATCCTGACAAGCAATTTACTGTCACCACAGACCCAATAACGAACAACGGCATTTTGAAAACAACTAAGGGCTTGGATTTTGAGGCCAAGCAGCAGTACATTCTACATGTGACAGCAACAAATGTGATCCCCTTTGAAGTGATTCTTCAGACTTCCACAGCCACTGTCACTGTCGATGTGCTGGACATCAATGAAGCCCCCATCTTTGTGCCCGCCGAAAAAAGAGTGGAAGTACCAGAAGACTTTGGGGTGGGCTTGGAAATCACTTCCTACACTGCTCGGGAGCCGGACACATTTATGCAACAGAAGATTACGTATCGGATTTGGAGGGACACTGCCAACTGGTTGGAGATTAATCCGGAGACTGGTGCCATTTCTACTCGGGCTGAGCTGGACAGAGAGGCCTTTGAGCATGTGAAGAACAGCACGTACACAGCTCTCATCATCGCCACCGACAATGGTTCTCCAATCGCCACTGGCACAGGAACCCTCCTCTTGATCCTCTCCGATGTGAACGACAATGCCCCCATACCAGAACCCCGAAGCATGCACTTCTGCCAGAGGGATCCACAGCCTCACATCATAAACATCATCGATCCAGATCTGTCCCCCAACACTTCCCCCTTCACAGCAGAACTCACACATGGGGCGAGTGTCAACTGGACCATTGAGTACAATGGCGCAGCCCAAGAGTCTCTCATCTTGAAGCCAAAGAAAACCTTAGAGGTGGGTGACTACAAAATCAATCTCAAGCTCATTGATAACCAAAACAAAGACCAAGTGACCACTTTGGATGTCATCGTGTGTGACTGTGAAGGGGCCGTCAACAACTGTATGAGGGCAAATTATGCGGAAGCTGGATTGCAGGTTCCCGCCATTCTCGGGATTCTTGGAGGAATCCTTGGTTTGCTACTTCTGATTCTGCTGCTCCTACTGTTTGTTCGGAGGAGAGGGGTGGTCAAAGAGCCCTTACTGCCTCCAGAAGATGACACCCGGGACAATGTTTATTACTATGATGAAGAAGGAGGTGGAGAAGAAGACCAGGATTTTGACTTGAGCCAGTTACACAGGGGCCTGGATGCTCGGCCTGAAGTGACTCGCAATGACGTAGCACCGACCCTCATGAGTGTGCCCCAGTATCGTCCCCGCCCTGCCAATCCTGATGAAATTGGGAATTTTATTGATGAAAACCTGAAGGCTGCTGACAGTGACCCCACAGCTCCCCCTTACGACTCTCTGCTCGTGTTCGACTATGAAGGAAGTGGTTCCGAAGCTGCTAGTCTGAGCTCCCTGAACTCCTCGGAGTCAGACAAGGATCAAGACTATGACTACCTGAGTGAGTGGGGCAATCGCTTCAAGAAGCTGGCGGACATGTATGGAGGTGGCGAGGATGACTAA

Related Sequences

XP_004843018.1 Protein

Cdh1 PREDICTED: cadherin-1 [Heterocephalus glaber]

Length: 894 aa      View alignments
>XP_004843018.1
MGPSCRSLSALLLLLQVSSWLCQEVEEPCQPGFGAESYTFTVPWHLERGRALGRVSFEGCTGRPRTAYFSTDSRFKVGTDGVVRVKWPLLFHKPEISFSVHALEFTFRKFSTKVTLKAEGPHPQHHNHHQRRDNHHHQDPDQDISPGSQIEVIKFPNFHHGLRRQKRDWVIPPISCSENEKGPFPKRLVQIKSNRDKETKVFYSITGQGADTPPVGVFIIERETGWLMVTEPLDREKIANYTLFSHAVSSNGNAVEDPMEIVITVTDQNDNRPQFIKEVFEGSVMEGALPGTSVMQVSATDADDPNTYNAEIAYAILSQEPTLPHSQMFTINRITGVISVVTTGLDRESYPTYTLEVQAADLQGEGLSTTAKAVITVTDVNDNPPIFNPTTYEGQVPENEPEAVITTLTVTDDDAPNTPAWQAVYSILNDPDKQFTVTTDPITNNGILKTTKGLDFEAKQQYILHVTATNVIPFEVILQTSTATVTVDVLDINEAPIFVPAEKRVEVPEDFGVGLEITSYTAREPDTFMQQKITYRIWRDTANWLEINPETGAISTRAELDREAFEHVKNSTYTALIIATDNGSPIATGTGTLLLILSDVNDNAPIPEPRSMHFCQRDPQPHIINIIDPDLSPNTSPFTAELTHGASVNWTIEYNGAAQESLILKPKKTLEVGDYKINLKLIDNQNKDQVTTLDVIVCDCEGAVNNCMRANYAEAGLQVPAILGILGGILGLLLLILLLLLFVRRRGVVKEPLLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDARPEVTRNDVAPTLMSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSESDKDQDYDYLSEWGNRFKKLADMYGGGEDD