Details from NCBI annotation

Gene Symbol Cirh1a
Gene Name cirrhosis, autosomal recessive 1A (cirhin)
Entrez Gene ID 101717614

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CIRH1A ENSCPOG00000005982 (Guinea pig)

Gene Details

cirrhosis, autosomal recessive 1A (cirhin)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005400, Guinea pig)

Protein Percentage 96.06%
CDS Percentage 93.83%
Ka/Ks Ratio 0.09315 (Ka = 0.0188, Ks = 0.2022)

CIRH1A ENSG00000141076 (Human)

Gene Details

cirrhosis, autosomal recessive 1A (cirhin)

External Links

Gene Match (Ensembl Protein ID: ENSP00000327179, Human)

Protein Percentage 95.04%
CDS Percentage 91.59%
Ka/Ks Ratio 0.08266 (Ka = 0.0247, Ks = 0.2982)

Cirh1a ENSMUSG00000041438 (Mouse)

Gene Details

cirrhosis, autosomal recessive 1A (human)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000048377, Mouse)

Protein Percentage 90.67%
CDS Percentage 87.85%
Ka/Ks Ratio 0.11018 (Ka = 0.0483, Ks = 0.4382)

Cirh1a ENSRNOG00000020333 (Rat)

Gene Details

cirrhosis, autosomal recessive 1A (cirhin) (Cirh1a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027553, Rat)

Protein Percentage 92.27%
CDS Percentage 88.24%
Ka/Ks Ratio 0.09072 (Ka = 0.0406, Ks = 0.4474)

Genome Location

Sequence Coding sequence

Length: 2061 bp    Location: 17205911..17176377   Strand: -
>XM_004842957.1
ATGGGTGAATTCAAAGTCCATCGAGTACGTTTCTTTAATTATGTCCCACCAGGGATTCGCTGTGTGGCTTACAATAACCAGTCAAATAGATTGGCTGTTTCACGGACAGATGGCACTGTGGAAATTTATAATTTGTCAGCAAACTACTTTCAGGAGAAATTTTTCCCAGGTCATGAATCTCGTGCTACAGAAGCTCTGTGTTGGGCAGAAGGGCAGCGACTCTTTAGTGCTGGACTCAATGGAGAAATTCTTGAGTATGACTTACAGGCATTAAACATCAAATATGCTATGGATGCCTTTGGCGGACCCATTTGGAGTATGATTGCCAGCCCCAGTGGCTCTCAACTTTTGGTTGGCTGTGAAGATGGATCTGTGAAACTGTTTCAAATCACCCCTGACAAAATCCAGTTTGAAAGAAATTTTGATCCGCAGAAAAGTCGCGTCCTGAGTCTCAGCTGGCATCCCTCTGGTACCCACATTGCAGCAGGCTCCATAGACTACATTAGTGTGTTTGATGTCAAATCAGGCAGTGCTATTCATAAGATGATCGTAGATAGGCAATACATGGGTGTGTCTAAGCGGAAGTGCATTGTGTGGGGTGTGGCCTTCTTATCTGATGGCACGGTTATAAGTGTGGACTCTGCTGGGAAAGTGCAGTTCTGGGATTCGGCTACAGGGACGCTTGTCAAGAGCCATCTCATCGCAAATGCTGATGTACAGTCCATTGCTGTTGCTGATCAAGAAGACAGTTTTGTGGTGGGCACTGCTGAAGGCACAGTATTCCATTTTCAGCTGGTCTCTGTGACTTCCAACAGTACTGAGAAGCAGTGGGTGCGGACCAAACCATTCCAGCACCATACCCATGACGTGCGCACTGTGGCCCACAGCCCAACAGCACTGATATCTGGAGGCACGGACACCCACTTAGTCATTCGCCCTCTCATGGAGAAGGTGGAGGTAAAGAACTATGATGCTGCTCTCCGAAAAATCACCTTTCCCCATCGGCGACTCATTTCCTGTTCTAGAAAGAGGCAGCTTCTCCTCTTCCAGTTTGCTCATCACTTGGAACTTTGGCGACTGGGATCTACAGCTGCAACAGGCAAGAATGGGGATATCCTTCCACTTTCTAAAAATGCTGATCATTTACTGCACCTCAAGACAAAGGGCCCTGAGAACATTATTTGCAGCTCTATCTCCCCATGTGGAAGCTGGATAGCCTACTCTACAGCATCTCGGGTTTTTCTCTATCGGTTGAATTATGAACATGACAACATAAGCCTCCAGAGGATTTCCAAAATGCCAGCATTCCTTCGCTCTGCCCTTCAGATTTTGTTTTCTGAAGATTCAACAAAGCTCTTTGTGGCATCAAATCAGGGGTCTTTACATATTATTCGGCTATTGGAAGGCAGCTTCAAGCACCTGCATACTTTTCAGCCTCAGTCAGGGACAGTGGAGGCCATGTGTCTTTTGGCAGTCAGTCCAGATGGGAATTGGCTGGCTGCATCAGGTACCAGTGCTGGAGTCCATGTATACAATGTAAAACATCTAAAGCTTCACTGCACGGTGCCTGCTTACAATTTTCCAGTGACTGCTCTGGCCATTGCTCCCAATACCAACAACCTTGTCATTGCTCATTCTGACCAACAGGTATTTGAGTACAGCATCCCAGACAAACAGTATACAGAGTGGAGCCGGAATGTCCAGAAGCAGGGGTTTCACCATCTTTGGCTCCAAAGGGATACACCCATCACACACATCAGTTTTCATCCCAAGCGACCAATGCACATCCTCCTCCATGATGCCTACATGTTCTGCATCATTGACAAGTCATTGCCTCTTCCGAATGATAAAACAGTACTTTACAATCCACTTCCTCCTACGAATGAATCAGATGTCTTCCGGAGGCGGACAGGCCATGCCTTTAAAATTTCTAAGATATATAAGCCCTTACTCTTCATGGATCTTTTGGATGAAGGGACACTTGTGGCAGTAGAACGACCCCTTGATGATATTATCGCTCAGCTCCCACCACCCATCAAAAAGAAGAAATTTGGAACCTGA

Related Sequences

XP_004843014.1 Protein

Cirh1a PREDICTED: cirhin [Heterocephalus glaber]

Length: 686 aa      View alignments
>XP_004843014.1
MGEFKVHRVRFFNYVPPGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHESRATEALCWAEGQRLFSAGLNGEILEYDLQALNIKYAMDAFGGPIWSMIASPSGSQLLVGCEDGSVKLFQITPDKIQFERNFDPQKSRVLSLSWHPSGTHIAAGSIDYISVFDVKSGSAIHKMIVDRQYMGVSKRKCIVWGVAFLSDGTVISVDSAGKVQFWDSATGTLVKSHLIANADVQSIAVADQEDSFVVGTAEGTVFHFQLVSVTSNSTEKQWVRTKPFQHHTHDVRTVAHSPTALISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLISCSRKRQLLLFQFAHHLELWRLGSTAATGKNGDILPLSKNADHLLHLKTKGPENIICSSISPCGSWIAYSTASRVFLYRLNYEHDNISLQRISKMPAFLRSALQILFSEDSTKLFVASNQGSLHIIRLLEGSFKHLHTFQPQSGTVEAMCLLAVSPDGNWLAASGTSAGVHVYNVKHLKLHCTVPAYNFPVTALAIAPNTNNLVIAHSDQQVFEYSIPDKQYTEWSRNVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHDAYMFCIIDKSLPLPNDKTVLYNPLPPTNESDVFRRRTGHAFKISKIYKPLLFMDLLDEGTLVAVERPLDDIIAQLPPPIKKKKFGT