Sequence details NCBI ID: XM_004842955.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Vps4a
Gene Name vacuolar protein sorting 4 homolog A (S. cerevisiae), transcript variant X5
Entrez Gene ID 101716007

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000003700 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003340, Guinea pig)

Protein Percentage 99.08%
CDS Percentage 95.42%
Ka/Ks Ratio 0.02255 (Ka = 0.0042, Ks = 0.1877)

Genome Location

Sequence Coding sequence

Length: 1314 bp    Location: 17059258..17046863   Strand: -
Raw sequence   
>XM_004842955.1
ATGACAACGTCAACCCTCCAGAAAGCCATTGATCTGGTGACGAAAGCCACAGAAGAGGATAAAGCCAAGAACTACGAGGAGGCGCTACGGCTGTACCAGCATGCCGTGGAGTACTTCCTGCACGCCATCAAGTATGAGGCTCACAGCGACAAGGCCAAGGAGAGCATTCGAGCCAAGTGCGTGCAGTACCTAGACCGGGCAGAGAAGCTGAAGGATTATTTAAAAAACAAAGAGAAACACGGCAAGAAGCCAGTGAAAGAGAATCAGAGTGAGGGCAAGGGCAGTGATAGTGACAGCGAAGGGGATAATCCAGAGAAGAAGAAGCTGCAGGAGCAATTGATGGGTGCTGTTGTGATGGAGAAGCCCAACATACGGTGGAATGATGTGGCTGGGCTGGAGGGTGCCAAGGAGGCCCTCAAAGAAGCTGTCATTTTGCCAATTAAATTTCCACACTTGTTCACAGGAAAGCGTACCCCTTGGCGAGGGATACTGCTCTTTGGACCCCCTGGCACAGGGAAATCATATCTGGCCAAAGCTGTGGCAACAGAGGCCAACAACTCCACCTTCTTCTCTGTGTCCTCCTCTGATCTGATGTCTAAGTGGCTGGGGGAGAGTGAGAAGCTCGTGAAGAACCTCTTTGAACTGGCCAGGCAGCACAAACCCTCCATCATCTTCATCGACGAGGTGGACTCCCTCTGTGGGTCTCGAAATGAAAATGAGAGCGAGGCTGCCCGGAGGATCAAAACAGAGTTCCTGGTCCAGATGCAGGGGGTGGGGAACAACAACGATGGGACTCTGGTTCTTGGTGCCACAAACATCCCCTGGGTGTTGGATTCGGCCATTAGAAGGAGGTTTGAAAAACGTATTTATATCCCATTGCCGGAGGAAGCTGCCCGTGCTCAGATGTTCCGGTTGCATCTGGGGAGCACTCCCCACAACCTCACAGATGCCAACATCCACGAGCTGGCCCGGAAGACAGAAGGCTACTCGGGTGCAGACATCAGCATCATTGTGCGGGACTCCCTCATGCAGCCCGTCAGAAAAGTCCAGTCAGCAACGCACTTCAAGAAGGTCTGTGGCCCTTCCCGCACCAACCCTAGCATTATGATCGATGACCTCCTGACTCCATGCTCACCAGGGGACCCAGGAGCCATAGAGATGACTTGGATGGATGTCCCTGGTGACAAACTCTTAGAGCCTGTGGTTTGCATGTCCGACATGCTCCGGTCTTTGGCTACCACCCGGCCCACGGTAAATGCAGATGACCTCCTGAAAGTGAAGAAATTCTCAGAGGACTTTGGACAGGAGAGTTAA

Related Sequences

XP_004843012.1 Protein

Vps4a PREDICTED: vacuolar protein sorting-associated protein 4A isoform X5 [Heterocephalus glaber]

Length: 437 aa      
>XP_004843012.1
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLDRAEKLKDYLKNKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSIMIDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVCMSDMLRSLATTRPTVNADDLLKVKKFSEDFGQES