Sequence details NCBI ID: XM_004842945.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pdf
Gene Name peptide deformylase (mitochondrial)
Entrez Gene ID 101714125

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDF ENSCPOG00000003745 (Guinea pig)

Gene Details

peptide deformylase (mitochondrial)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003382, Guinea pig)

Protein Percentage 88.56%
CDS Percentage 88.98%
Ka/Ks Ratio 0.11205 (Ka = 0.0561, Ks = 0.5008)

PDF ENSG00000258429 (Human)

Gene Details

peptide deformylase (mitochondrial)

External Links

Gene Match (Ensembl Protein ID: ENSP00000288022, Human)

Protein Percentage 77.37%
CDS Percentage 80.11%
Ka/Ks Ratio 0.10434 (Ka = 0.1315, Ks = 1.2606)

Pdf ENSMUSG00000078931 (Mouse)

Gene Details

peptide deformylase (mitochondrial)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000138676, Mouse)

Protein Percentage 80.52%
CDS Percentage 80.09%
Ka/Ks Ratio 0.10447 (Ka = 0.1182, Ks = 1.1313)

Pdf ENSRNOG00000022303 (Rat)

Gene Details

Protein Pdf

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036742, Rat)

Protein Percentage 80.52%
CDS Percentage 79.22%
Ka/Ks Ratio 0.09749 (Ka = 0.126, Ks = 1.2922)

Genome Location

Sequence Coding sequence

Length: 843 bp    Location: 17041298..17044086   Strand: +
Raw sequence   
>XM_004842945.1
ATGACAATAAACTTGACCAGTGGTCACAACCTGGGTATGAGGCTCGAGTCCCGGAAGGCAAGTGGGAGTGCGTTTCCGGCGACCCGGCGGCTGGAGGAAGGGGCGGGACCCCGGGTTCCTCTGCGCGCCATGGCTCTGCTAGGGGTCGGGTTGCTGCAGACTCTACTGCTGCGGGCACGTGCGGGCGGTGTCCGGGCCTGCAGCTCTTCGGCTTCCGCAGACGGCCTGGAGGGCCAGGCGCGCCCGCGCTCCTACTGGTGCTACGTGAGGCGCCTGATACAGGGAGCGCCGCGGCCGCCCTACGCGCACGTGTGCCAGGTCGGAGACCCGGTGCTCCGGGTCGTGGCGGCCCCAGTGGAGCCGGCGCAGCTGGCGGGGCCGGAGCTGCAGAAGCTGGTGCAGAAGCTGGTGCAGGTGATGCGGCGGCGGCGCTGCGTGGGCCTGAGCGCGCCGCAGCTGGGGGTGCCGCTGCAGGTACTGGCCCTGGAGCTCCCCGAAGAGCTCTTCCGGGCCTGTGCGCCGCGCCTGCGCGAACTCCGCCAGATGGACCCCTTCCCGCTGCGTGTTTTCGTGAACCCCAGTTTGCGCGTGCTGGACCGAAGCCTAGTCACCTTCCCAGAGGGCTGCGAGAGCGTCGCCGGCTTCCTGGCCTACGTGCCTCGCTTCCAGGCAGTGCAGATCTCAGGGCTGAACCCAAGAGGAGAGCAGGTGGTGTGGCAGGCAAGTGGCTGGACCGCCCGCATCATCCAGCATGAGATGGACCACTTGCAGGGCTGCCTGTTCATTGACAAAATGGACAGCAGGACGTTTACAAACATCCACTGGATGGAGGTGAATGACTGA

Related Sequences

XP_004843002.1 Protein

Pdf PREDICTED: peptide deformylase, mitochondrial [Heterocephalus glaber]

Length: 280 aa      View alignments
>XP_004843002.1
MTINLTSGHNLGMRLESRKASGSAFPATRRLEEGAGPRVPLRAMALLGVGLLQTLLLRARAGGVRACSSSASADGLEGQARPRSYWCYVRRLIQGAPRPPYAHVCQVGDPVLRVVAAPVEPAQLAGPELQKLVQKLVQVMRRRRCVGLSAPQLGVPLQVLALELPEELFRACAPRLRELRQMDPFPLRVFVNPSLRVLDRSLVTFPEGCESVAGFLAYVPRFQAVQISGLNPRGEQVVWQASGWTARIIQHEMDHLQGCLFIDKMDSRTFTNIHWMEVND