Sequence details NCBI ID: XM_004842846.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Znrf1
Gene Name zinc and ring finger 1, E3 ubiquitin protein ligase, transcript variant X3
Entrez Gene ID 101711624

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ZNRF1 ENSCPOG00000010190 (Guinea pig)

Gene Details

zinc and ring finger 1, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009151, Guinea pig)

Protein Percentage 99.12%
CDS Percentage 97.36%
Ka/Ks Ratio 0.04044 (Ka = 0.004, Ks = 0.0998)

ZNRF1 ENSG00000186187 (Human)

Gene Details

zinc and ring finger 1, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSP00000335091, Human)

Protein Percentage 98.24%
CDS Percentage 96.33%
Ka/Ks Ratio 0.05031 (Ka = 0.0078, Ks = 0.1541)

Znrf1 ENSMUSG00000033545 (Mouse)

Gene Details

zinc and ring finger 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000133309, Mouse)

Protein Percentage 97.36%
CDS Percentage 95.3%
Ka/Ks Ratio 0.05981 (Ka = 0.0116, Ks = 0.1933)

Znrf1 ENSRNOG00000019028 (Rat)

Gene Details

Protein Znrf1; RCG51260, isoform CRA_a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025716, Rat)

Protein Percentage 96.92%
CDS Percentage 95.01%
Ka/Ks Ratio 0.06904 (Ka = 0.0136, Ks = 0.197)

Genome Location

Sequence Coding sequence

Length: 684 bp    Location: 11954455..11848440   Strand: -
Raw sequence   
>XM_004842846.1
ATGGGTGGCAAGCAGAGCACGGCGACCCGCTCCCGGGGCCCCTTCCCGGGGGTCTCCACCGATGACAGCGCCGTGCCCCCGCCGGGAGGGGCGCCCCACTTTGGGCACTACCGGACGGGCAGCGGGGCCATGGGGCTACGCAGCCGCTCGGTCAGCTCGGTGGCGGGCATGGGCATGGACCCCAGCACGGCCAGCGGAGTGCCCTTTGGCCTCTACACCCCCGCCTCCCGGGGGACTGGCGACTCCGAGAGGGCGCCCGGCGGCGGAGGGTCTGCGTCCGACTCCAGCTATGCCCACGGTAATGGTTACCAGGAGACGGGCGGCGGTCACCATAGAGACGGGATGCTGTACCTGGGCTCCCGAGCCTCGCTGGCGGATGCTCTACCTCTGCACATCGCACCCAGGTGGTTCAGCTCGCACAGTGGTTTCAAGTGCCCCATTTGCTCCAAGTCTGTGGCTTCCGATGAGATGGAAATGCACTTTATAATGTGTCTGAGCAAACCTCGCCTCTCCTACAATGATGATGTGCTGACTAAAGATGCGGGTGAGTGTGTGATCTGCCTAGAGGAGCTGCTTCAGGGGGACACGATAGCCAGGCTGCCCTGCCTGTGCATCTATCACAAAAGCTGCATAGACTCGTGGTTTGAAGTGAACAGATCTTGTCCAGAACACCCTGCGGACTGA

Related Sequences

XP_004842903.1 Protein

Znrf1 PREDICTED: E3 ubiquitin-protein ligase ZNRF1 isoform X3 [Heterocephalus glaber]

Length: 227 aa      View alignments
>XP_004842903.1
MGGKQSTATRSRGPFPGVSTDDSAVPPPGGAPHFGHYRTGSGAMGLRSRSVSSVAGMGMDPSTASGVPFGLYTPASRGTGDSERAPGGGGSASDSSYAHGNGYQETGGGHHRDGMLYLGSRASLADALPLHIAPRWFSSHSGFKCPICSKSVASDEMEMHFIMCLSKPRLSYNDDVLTKDAGECVICLEELLQGDTIARLPCLCIYHKSCIDSWFEVNRSCPEHPAD