Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101706576

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FOXF1 ENSCPOG00000000954 (Guinea pig)

Gene Details

forkhead box F1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000858, Guinea pig)

Protein Percentage 99.19%
CDS Percentage 95.61%
Ka/Ks Ratio 0.00643 (Ka = 0.0031, Ks = 0.4793)

FOXF1 ENSG00000103241 (Human)

Gene Details

forkhead box F1

External Links

Gene Match (Ensembl Protein ID: ENSP00000262426, Human)

Protein Percentage 96.54%
CDS Percentage 93.09%
Ka/Ks Ratio 0.0217 (Ka = 0.0154, Ks = 0.7106)

Foxf1 ENSMUSG00000042812 (Mouse)

Gene Details

forkhead box F1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000137662, Mouse)

Protein Percentage 91.27%
CDS Percentage 87.04%
Ka/Ks Ratio 0.03559 (Ka = 0.0415, Ks = 1.165)

Foxf1 ENSRNOG00000049906 (Rat)

Gene Details

Protein LOC687536; RCG51396

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065868, Rat)

Protein Percentage 91.53%
CDS Percentage 87.04%
Ka/Ks Ratio 0.03707 (Ka = 0.0407, Ks = 1.097)

Genome Location

Sequence Coding sequence

Length: 1284 bp    Location: 2599211..2602185   Strand: +
>XM_004842754.1
ATGACGGCAGAGGCGCAGCCGNGGCCGCTTGCGCAGCCCCCTCCCCCTCGCCCTCCTCCCCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCCGGCTCCTCGGCCGCGCAGAGCAGCGGCAGCAGCGGCGGCGGCGGCAGCAGCCACCCGATGTCTTCGGCGCCCGAGAAGCAGCAGCCCCCGCTCGGCGGCGGCGGCGGGGGAGGCGGCGCGGCCATGGACCCCGCGTCGTCCGGCCCGTCCAAGGCCAAGAAGACGAACGCCGGCATCCGCCGCCCGGAGAAGCCACCGTACTCGTACATCGCGCTCATCGTCATGGCCATCCAGAGCTCTCCCACCAAGCGCCTGACCCTCAGCGAGATCTACCAGTTCCTGCAGGCGCGCTTCCCCTTCTTCCGCGGCGCCTACCAGGGCTGGAAGAACTCAGTGCGCCACAACCTCTCGCTCAACGAGTGCTTCATCAAACTGCCCAAGGGGCTCGGCCGGCCCGGCAAGGGCCACTACTGGACCATCGACCCGGCCAGCGAGTTCATGTTCGAGGAGGGCTCCTTTCGGCGGCGGCCGCGCGGCTTCCGAAGGAAGTGCCAGGCGCTCAAGCCCATGTACAGCATGATGAACGGGCTGGGCTTCAACCACCTCCCGGACACCTACAGCTTCCAGGGCTCGGCCGGCGGCCTCTCGTGCCCGCCCAACAGCCTGGCGCTGGAGGGCAGCCTGGGCATGATGAATGGCCACTTGCCGGGTAACGTGGACGGCATGGCCCTCCCCAGCCACTCGGTGCCCCACCTGCCCTCCAACGGCGGCCACTCATACATGGGCAGCTGTGGCGGCACCGCGGCTGGCGAGTACCCGCACCACGACAGCTCTGTGCCGGCCTCCCCGCTGCTGCCCGCAGCCACCAGCGGGGTTATGGAGCCACACGCCGTCTACTCCGGCTCGGCCGCTGCCTGGCCACCCTCAGCCTCCGCAGCCCTCAACAGCGGCGCCTCTTACATCAAGCAGCAGCCCCTGTCGCCCTGTCCCCCCGCAGCCAACCCCCTGTCTGGCAGCCTCTCCACGCACTCCCTGGACCAGCCTTACCTGCACCAGAACAGCCACAATGCCCCAGCGGAGCTCCAAGGCATCCCTCGGTATCACTCGCAGTCACCCAGCATGTGTGACCGAAAGGAATTCGTCTTCTCTTTCAACGCCATGGCTTCCTCGTCCATGCACTCGGCAGGCGGGGGCTCCTACTACCACCAGCAGGTCACCTACCAAGACATCAAGCCCTGCGTGATGTGA

Related Sequences

XP_004842811.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: forkhead box protein F1 [Heterocephalus glaber]

Length: 427 aa      View alignments
>XP_004842811.1
MTAEAQPXPLAQPPPPRPPPPPPLPPPPPPPPGSSAAQSSGSSGGGGSSHPMSSAPEKQQPPLGGGGGGGGAAMDPASSGPSKAKKTNAGIRRPEKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYSMMNGLGFNHLPDTYSFQGSAGGLSCPPNSLALEGSLGMMNGHLPGNVDGMALPSHSVPHLPSNGGHSYMGSCGGTAAGEYPHHDSSVPASPLLPAATSGVMEPHAVYSGSAAAWPPSASAALNSGASYIKQQPLSPCPPAANPLSGSLSTHSLDQPYLHQNSHNAPAELQGIPRYHSQSPSMCDRKEFVFSFNAMASSSMHSAGGGSYYHQQVTYQDIKPCVM