Details from NCBI annotation

Gene Symbol Tldc1
Gene Name TBC/LysM-associated domain containing 1, transcript variant X11
Entrez Gene ID 101723427

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TLDC1 ENSCPOG00000020731 (Guinea pig)

Gene Details

TBC/LysM-associated domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014357, Guinea pig)

Protein Percentage 75.88%
CDS Percentage 83.55%
Ka/Ks Ratio 0.19219 (Ka = 0.1293, Ks = 0.673)

TLDC1 ENSG00000140950 (Human)

Gene Details

TBC/LysM-associated domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000343635, Human)

Protein Percentage 71.71%
CDS Percentage 77.27%
Ka/Ks Ratio 0.1558 (Ka = 0.1694, Ks = 1.087)

Tldc1 ENSMUSG00000034105 (Mouse)

Gene Details

TBC/LysM associated domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044430, Mouse)

Protein Percentage 62.64%
CDS Percentage 71.87%
Ka/Ks Ratio 0.14852 (Ka = 0.2445, Ks = 1.646)

Tldc1 ENSRNOG00000016224 (Rat)

Gene Details

Protein RGD1308461

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021743, Rat)

Protein Percentage 66.67%
CDS Percentage 74.32%
Ka/Ks Ratio 0.1331 (Ka = 0.2074, Ks = 1.558)

Genome Location

Sequence Coding sequence

Length: 1383 bp    Location: 1468767..1451212   Strand: -
>XM_004842718.1
ATGGGGAACAGCAAAAGCCACTCGGGGAGGACTTGTTGCTCCCAGTTTCTTCCCGAGGAGCAGGCCGAGATCGATAGGTTGTTTGACGCCCTGTCGTCGCAGAAAGACGGTGCGGAGACCTCACCCAGGTCCTTCTCCCTGAAGGCTCTGCAGAGCCACGTCGGGGAGGCGCTTCCCCCAGAGATGCTCGCCAGGCTCTATGACGGCATGCGGCAGGTGTGCGGGACTGGCCCTGCGCAGGGATCCTGCCAGAGCGTCTCCCGGGAGCAGTTCACGGTGTCGCTGTCACACCTGCTCAGGGGAAGCTCCGAGGAGAGGAGTGTCGTGATCCTGAAGATGATTTCTGCCAGCGGAGGTCCCGTGAAGGCCAGAGAAGTGCGGAAGTTCACAGAGGACCTGGTGGGCTCTGTGGTGCACGTGCTGAGCCACAGGCAAGAGCTGCGAGGCTGGGCCGGGAAGGAGGCCCCGGGAGCCCCTGCCAGGACACAGGCGCTGGCTGCCCAGCTGCTGTCCGAGCTGAAGCTTCCAGGTGGCGAGAGGCTGCAGGGGCCTCAGTGGCTGGAGGGCAACTGTGACCGAGCTGCGATCGAGGACTGGGTCTTCAGGGTCCCCCGTGTGGCCATGTTCCTGAGCGTGGTGGTCCACAGGGGCCTTCTTGTCCTAGGCGTGCCCCCGGATCTCGCCATGCTGGTCCCCGAGCGCCAGGTGGAGCCGGGGCAGGAGCTGACGAGCCTGCTGGACGTGCTGGCCGTCATCTTCCTCAGCTCCCACCTGGCCCCAAGGCAGCGGCACTGCTGGCGCCTGCTCTTTGCCTCCCACCTGCACGGGCAGAGCTTCTCGCAGCTGTGTGGCCGTGTCACCCACCGTGGGCCCTGCCTGGCCCTCCTGGAGGACCGCAGCGGCCACGTGTTCGGGGGCTTCGCCTCCTGCTCCTGGGAGGTCAAGCCGCAGTTCCAAGGGGACAACAAGTGCTTCCTGTTCTCCATTGCCCCCAGCATGGCCGTGTACACACCCACGGGCTACAACGACCACTACATGTACCTGAACCACAGCCAGCAGACCATCCCCAACGGGCTGGGCATGGGAGGGCAGCACAGCTACTTCGGGCTGTGGGTGGACGCCGACTTCGGGAACGGGCACAGCAAGGCCAAGCCCACGTGTACCACGTACGACAGCCCGCAGCTGTCCGCCGAGGAGGACTTCCGGTTCGAGAAGATGGAGGTGTGGGCCGTCGGAGAGCCCGTGGAGTCAGAGCTGGCCAAGGGTAAGAAAAGCGTCCTCGACGTGGACCCCGGGGCTCAGATTTTGCTGGAGGCCACTGGGTGGACTCGGCAGAGCGCAGGGTTCCCGGAAATCCCCGACAGCCACAGTGCCGACCAGTGA

Related Sequences

XP_004842775.1 Protein

Tldc1 PREDICTED: TLD domain-containing protein KIAA1609 homolog isoform X11 [Heterocephalus glaber]

Length: 460 aa      View alignments
>XP_004842775.1
MGNSKSHSGRTCCSQFLPEEQAEIDRLFDALSSQKDGAETSPRSFSLKALQSHVGEALPPEMLARLYDGMRQVCGTGPAQGSCQSVSREQFTVSLSHLLRGSSEERSVVILKMISASGGPVKAREVRKFTEDLVGSVVHVLSHRQELRGWAGKEAPGAPARTQALAAQLLSELKLPGGERLQGPQWLEGNCDRAAIEDWVFRVPRVAMFLSVVVHRGLLVLGVPPDLAMLVPERQVEPGQELTSLLDVLAVIFLSSHLAPRQRHCWRLLFASHLHGQSFSQLCGRVTHRGPCLALLEDRSGHVFGGFASCSWEVKPQFQGDNKCFLFSIAPSMAVYTPTGYNDHYMYLNHSQQTIPNGLGMGGQHSYFGLWVDADFGNGHSKAKPTCTTYDSPQLSAEEDFRFEKMEVWAVGEPVESELAKGKKSVLDVDPGAQILLEATGWTRQSAGFPEIPDSHSADQ