Sequence details NCBI ID: XM_004842694.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Zfpm1
Gene Name zinc finger protein, FOG family member 1, transcript variant X5
Entrez Gene ID 101718410

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ZFPM1 ENSCPOG00000024281 (Guinea pig)

Gene Details

zinc finger protein, FOG family member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014485, Guinea pig)

Protein Percentage 83.2%
CDS Percentage 84.76%
Ka/Ks Ratio 0.16264 (Ka = 0.1, Ks = 0.6151)

ZFPM1 ENSG00000179588 (Human)

Gene Details

zinc finger protein, FOG family member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000326630, Human)

Protein Percentage 80.02%
CDS Percentage 83.14%
Ka/Ks Ratio 0.12014 (Ka = 0.1063, Ks = 0.8844)

Zfpm1 ENSMUSG00000049577 (Mouse)

Gene Details

zinc finger protein, multitype 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000058037, Mouse)

Protein Percentage 76.67%
CDS Percentage 78.48%
Ka/Ks Ratio 0.11368 (Ka = 0.1355, Ks = 1.1919)

Zfpm1 ENSRNOG00000043077 (Rat)

Gene Details

zinc finger protein, multitype 1 (Zfpm1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061082, Rat)

Protein Percentage 77.57%
CDS Percentage 78.46%
Ka/Ks Ratio 0.10439 (Ka = 0.1294, Ks = 1.24)

Genome Location

Sequence Coding sequence

Length: 2622 bp    Location: 1015669..988114   Strand: -
Raw sequence   
>XM_004842694.1
ATGGAGGTGCCAGGGCCTGAGACACTGCGGGAGGAGGCAACCAGCCCCTGGAGCGGGCCAGAGGAGCTGGAGCTGGAGCTTCGGGATGGACAGAGGTGCGTGCAGGCCCGACTCAGCCTCGCCAAGGGCCTGTGCTGGGGCCCGTTCCGTGGGAGCATCCAGACCAGAGCACCATCCCCTGGGCAGGCAGAACCGGGCCCGGCCCTGACCCTGCTGCTCACAGATGCAGCCTGCTGGCTGAGGACGCTGCCCCAGGCCCTGACCGAGGCTGACGCCAACTCGGAGATCTACAGGAAGGATGGCAGCCTCTGGTGCAGGGTCACCAGGCCGGTGCCCGCGGGCGAGGCCCTGTGTGCACTCCTGACGGCCAAGCCCCGGGGCACCCCCAGCCATCCCACGAAGGAGGAACCAGCAGAGCCCGAGAACCCTGCCCCAGTGCCCCCTGACATCCAGCTGCTGCCCCAGCAGGCCGGCATGGCGTCCATCCTCGCCACAGCAGTCATCAACAAGGACGTCTTCCCGTGCAAGGACTGTGGCATCTGGTACCGCAACGAGCGCAACCTGCAAGCCCACCTCCTCTACTACTGCGCCAGCCGCCAGGGTGCCAGCTCCCCAGCCGCGGCAGCCACAGAGGACAAGCCTAAGGAGCCATACCCCAACGAGCGGATCTGCCCCTTCCCACAGTGCCGTAAGAGCTGCCCCAGCGCCAGCTCCCTGGAGATCCACATGCGCAGCCACAGCGGAGAGCGGCCCTTTGTATGCCTCATCTGCCTGTCGGCCTTCACCACCAAGGCCAACTGCGAACGCCACCTCAAGGTGCACACAGACACGCTCAGCGGTGTCTGTCACAGCTGTGGCTTCATCTCCACCACTCGGGACATCCTCTATAGCCACCTGGTGACCAGCCACATGGTCTGCCAGCCCGGCTCCAAGGGGGAGATATACTCGCCAGGTGCAGCACACCCAGCTGCCAAGCTGCCTGCAGACGCCCTCGCCAGCCTCCAGAAGCACGCAGGCCTGCATGGTCCCCTGGCCTCCGCGGACCTAGGCCTGGCACCCATCCCATCACCAGGCCTGGACAAGACCCTGGTTGAGGCCACCAACGGAGAGGCCCAGAATGGGAGCGGCGGCGAGACCCCCGCGATCCCCAAGAACGTCAAGGTGGAGGCGGCCGAGGAGTCGGAGGCAGCGCGCGTGCCAGGCCAGGCAGAGCCTGCACCCCGGGCCCCGTCGCGGACGCCGTCGCCCCACAGCCCCGGTGCGGCCCGCGTGAAGGCCGAGATGCCCAGTCCCACGCCTGGCGCCAGCCCCGCACCCGGAGAGCTGGGTTTGGCCGGCGCGCTTTTCCTGCCGCAGCTCGTGTTCGCGCCAGACGCGGGCGCCGCCCCCGGCCCCGCGGCGCCCCAGGCCTCGGAGATCCTGGCCAAGATGTCGGAGCTGGTGCACAGCCGGCTGCAGCAGGGCGCGGGGGCGCCGGCCGCGCTGCTGGCGGGGACCAAGGGTGCCACGTGCTTCGAGTGCGAGATCACCTTCAACAACGTCAACAACTTCTACGTGCACAAGCGCCTCTACTGCTCCGGCCGGCGCCCGCCCGAAGACGCGCCCGCCGCGCGCAGGCCCAAGGCGCCACCGGGCGGCGCGCCTGCAGAACCCGATGCGCCGCGATCGCCGCCGGCGCCCGGGGCGCGTGAGGACGAGGCGGGCGGCGCAGCCACGCCCGAGGCCGATGGGCCCGGCCGGGGCAGCGAGGGCAGCCAGAGCCCGGGCAGCTCAGTGGACGACGCGGAGGACGACCCCAGCCGTACACTGTGCGAGGCCTGCAACATCCGCTTCAGCCGCCACGAGACCTACACGGTGCACAAGCGCTACTACTGCGCCTCGCGCCACGACCCTCCGCCGCGCAGGCCACCCGCTCCCGCTCCCGCTCCAGGGTCCGCGGCGCCCACGCTGACCACGCCGCCTGTGCGCACGCGCCGGCGCCGCAAGCTGTACGAGCTGCACGCGCCCGGCTCCGCCCCCGCACCGCCTGGCCATGGCCCCCCAGCGGCTGGCCCCGCGCCCGAGCCCCCCGGCTCCCCCGGACCCGGAGGCGGAAATGGGAGCGCCGGTCCCGCCCCCGCGCGCTCGCCCGCGCCGGCCGCCGCCGACGGCCCCATCGACCTGAGCAAGCGGCCGCGCCGACAGCCCCACGACGCGCCCGCCGCGCTGCCCGCGCTGGCCGACTACCACGAGTGCACGGCCTGCCGCGTGAGCTTCCACAGCCTCGAGGCCTACCTGGCTCACAAGCAGTACGCGTGCCCCGCCGCGCCACTGCGCCCGGCCGCCGTGTGCCCCTACTGCCCGGCCAATGGGCGTGCGCGCGGCGACCTGGGGGAGCACCTACGCCGGGCACACGGCCTGCGGGACAGCCCCCCGCCGCGCTCCCCGTCCCCGCCGCCCGCGCCCGCCGAGGCCCCCGCCGACCCGGGCGCCCCCACCCCCGGTAAGGGCCCGCCCGCGCCTCCCACGCCCGGTGGCCACCGCTACTGCCGCTTGTGCAACATCCGGTTCAGCAGCCTGTCCACCTTCATCGCTCACAAGAAGTACTACTGCTCCTCGCACGCCGCCGAGCACGTGAAGTGA

Related Sequences

XP_004842751.1 Protein

Zfpm1 PREDICTED: zinc finger protein ZFPM1 isoform X5 [Heterocephalus glaber]

Length: 873 aa      View alignments
>XP_004842751.1
MEVPGPETLREEATSPWSGPEELELELRDGQRCVQARLSLAKGLCWGPFRGSIQTRAPSPGQAEPGPALTLLLTDAACWLRTLPQALTEADANSEIYRKDGSLWCRVTRPVPAGEALCALLTAKPRGTPSHPTKEEPAEPENPAPVPPDIQLLPQQAGMASILATAVINKDVFPCKDCGIWYRNERNLQAHLLYYCASRQGASSPAAAATEDKPKEPYPNERICPFPQCRKSCPSASSLEIHMRSHSGERPFVCLICLSAFTTKANCERHLKVHTDTLSGVCHSCGFISTTRDILYSHLVTSHMVCQPGSKGEIYSPGAAHPAAKLPADALASLQKHAGLHGPLASADLGLAPIPSPGLDKTLVEATNGEAQNGSGGETPAIPKNVKVEAAEESEAARVPGQAEPAPRAPSRTPSPHSPGAARVKAEMPSPTPGASPAPGELGLAGALFLPQLVFAPDAGAAPGPAAPQASEILAKMSELVHSRLQQGAGAPAALLAGTKGATCFECEITFNNVNNFYVHKRLYCSGRRPPEDAPAARRPKAPPGGAPAEPDAPRSPPAPGAREDEAGGAATPEADGPGRGSEGSQSPGSSVDDAEDDPSRTLCEACNIRFSRHETYTVHKRYYCASRHDPPPRRPPAPAPAPGSAAPTLTTPPVRTRRRRKLYELHAPGSAPAPPGHGPPAAGPAPEPPGSPGPGGGNGSAGPAPARSPAPAAADGPIDLSKRPRRQPHDAPAALPALADYHECTACRVSFHSLEAYLAHKQYACPAAPLRPAAVCPYCPANGRARGDLGEHLRRAHGLRDSPPPRSPSPPPAPAEAPADPGAPTPGKGPPAPPTPGGHRYCRLCNIRFSSLSTFIAHKKYYCSSHAAEHVK