Details from NCBI annotation

Gene Symbol Cdt1
Gene Name chromatin licensing and DNA replication factor 1, transcript variant X1
Entrez Gene ID 101714018

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CDT1 ENSCPOG00000023857 (Guinea pig)

Gene Details

chromatin licensing and DNA replication factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018827, Guinea pig)

Protein Percentage 75.32%
CDS Percentage 78.11%
Ka/Ks Ratio 0.17967 (Ka = 0.1595, Ks = 0.8879)

CDT1 ENSG00000167513 (Human)

Gene Details

chromatin licensing and DNA replication factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000301019, Human)

Protein Percentage 69.48%
CDS Percentage 75.22%
Ka/Ks Ratio 0.18401 (Ka = 0.2017, Ks = 1.0963)

Cdt1 ENSMUSG00000006585 (Mouse)

Gene Details

chromatin licensing and DNA replication factor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000006760, Mouse)

Protein Percentage 70.07%
CDS Percentage 72.0%
Ka/Ks Ratio 0.14271 (Ka = 0.2203, Ks = 1.5437)

Cdt1 ENSRNOG00000013970 (Rat)

Gene Details

chromatin licensing and DNA replication factor 1 (Cdt1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018923, Rat)

Protein Percentage 69.89%
CDS Percentage 71.44%
Ka/Ks Ratio 0.14667 (Ka = 0.2245, Ks = 1.5308)

Genome Location

Sequence Coding sequence

Length: 1737 bp    Location: 813851..809328   Strand: -
>XM_004842674.1
ATGGCACAGAGCCGGGTCACCGACTTCTTCGCTTGCCGCCGCCCGGGGTCTGCAGCTCCGCGGGTCAAGGCAGCCTGCCGCACCCCGAGCCCTGCCCGGCCCGCGCCCGGCCCGGGCAGCAGCCGCAAGCGCGCCCGTCCTCCCGCTGCGTCCGGGGGCGAGCAGCCCGCGCCGCCCGCGCGCCGGAGACTGCGGCTTCGGGACGTGGACTCCTGTCCCAGTTCCCCAGCCACCCTCAGCTCCCTTGCCTGTCCTTCGCCGGTCAAGAAGATCAAGAAAACCTCCGCTCCTGCACCAGCAGGCCAGCTGTCCCTCCCCGCAGCCCCACAGGACAAGGTCCCCTCAAAGGACACCCTCTCTGAGCTCCAGGTGTGCCTTCAGCGTGCACGGGAGCTGGGCACACGCGTCCAGGCACTGAGGGCCAGGCCTCAGGAGGGTGCTGAGGAACCCAGCCCACCGGAGGCCAACCTCCAGGAGCAGCCATGTGGCCAGAAGACGCCTGCCTACCAACGCTTCCATGCCCTGGCCCAGCCCGGCCCACCAGGCCTTGTGCTGCCCTACAAGTACCAGGTGCTGGCCGAGATGTTTCGAAGCATGGACACCATTGTGGGCATGCTCCACAACCGCTCCGAGACTGCGACCTTTGCCAAGGTCAAGGGGGGGGTCCAGGACATGATGCGCAAGCGCTTCGAGGAGCGCAACGTGGGCCAGATCAAAACTGTGTATCCGATGTCCTACTGCTTCCGCCAGGAGCGCAATGTCCCCACCTTCAAGGACAGTGTCAAGAAGTCTGATTACCAGCTCACCATAGAGCCACTGCTGGGCCAGGAGCCTGGTGGCGCCGTGCCTCAGCTCACAGCCTCACGCCTGCTGCAGCGGCGACAGGTTTTCAGCCAGAACCTGGTGAACCGGGTCAAGGAGCACCACAAGGCCTTCCTCGCCTCCCTGACCCCCCCCATGGCTGTGCCTGAGGACCAGCTGACGCGCTGGCACCCGCGCTTCAACGTGGATGAGGTGCCTGACATCGAGCCTGCTGAGCTGCCCCAGCCACCCACCACGGAGCAGCTCACCAGTGCCCAGGAGGTGCTGGCCCGCGCCCGAAGCCTGATGTCGCCCAGGATGGAGAAGGCGTTGTGTCACGCAGCACTGTGTGCAGCGGAGCCCGGCAGCCCTGGATCCCCCGGCCCGGCCCTGCCAGCCAGCCCTGCCAGCCCGCCCAGCGCCCTGAAGGGTGTGCCCCAGGCCCTGCTGGAGCGGATCCGTGCCAAGGAGGCCCAGAAACAGCTGGCGCAGATGACGCGCTGCCCGGAGCACGAGCTGCGGCTGCAGCGGCTGCAGCGACTGCCCGAGCTGGCCCGCGTGCTGCGCGGTGTCTTCGTGTCTGAGAGAAAGCCCGCGCTCACCATGGAGGTGGCCTGCACCAGGATGGTGGGCAGCTGCCGTGCTGCCCTGAGCCTGGGTATGCGTGGGTCAGGGAGGAGTCCAGGGTGGGCAGGGTCCCGACCAGGGTGTCTATGCACCCGATGCCCACAGGGCGCCTGCTATGTGTGTGGGCAGTGGCCTCCAGGGCACCTACCTGCTCTGCAGCCTCCCCGGGGCCTTGCAAACCTGCTGTCCTTGTGGGCCTTGGGACAGACTCCTGACTCCTTACCCGTGTCCTCTCCTCCCAGACCACAGGCATGGTCTGCCCGAGGCTTTCAAGGCTGGGGACCCAGCTCTGCATTCGGGCTTCAGTGA

Related Sequences

XP_004842731.1 Protein

Cdt1 PREDICTED: DNA replication factor Cdt1 isoform X1 [Heterocephalus glaber]

Length: 578 aa      View alignments
>XP_004842731.1
MAQSRVTDFFACRRPGSAAPRVKAACRTPSPARPAPGPGSSRKRARPPAASGGEQPAPPARRRLRLRDVDSCPSSPATLSSLACPSPVKKIKKTSAPAPAGQLSLPAAPQDKVPSKDTLSELQVCLQRARELGTRVQALRARPQEGAEEPSPPEANLQEQPCGQKTPAYQRFHALAQPGPPGLVLPYKYQVLAEMFRSMDTIVGMLHNRSETATFAKVKGGVQDMMRKRFEERNVGQIKTVYPMSYCFRQERNVPTFKDSVKKSDYQLTIEPLLGQEPGGAVPQLTASRLLQRRQVFSQNLVNRVKEHHKAFLASLTPPMAVPEDQLTRWHPRFNVDEVPDIEPAELPQPPTTEQLTSAQEVLARARSLMSPRMEKALCHAALCAAEPGSPGSPGPALPASPASPPSALKGVPQALLERIRAKEAQKQLAQMTRCPEHELRLQRLQRLPELARVLRGVFVSERKPALTMEVACTRMVGSCRAALSLGMRGSGRSPGWAGSRPGCLCTRCPQGACYVCGQWPPGHLPALQPPRGLANLLSLWALGQTPDSLPVSSPPRPQAWSARGFQGWGPSSAFGLQ