Details from NCBI annotation

Gene Symbol Pabpn1l
Gene Name poly(A) binding protein, nuclear 1-like (cytoplasmic)
Entrez Gene ID 101710651

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PABPN1L ENSCPOG00000025951 (Guinea pig)

Gene Details

poly(A) binding protein, nuclear 1-like (cytoplasmic)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018565, Guinea pig)

Protein Percentage 83.21%
CDS Percentage 87.06%
Ka/Ks Ratio 0.19892 (Ka = 0.0873, Ks = 0.439)

PABPN1L ENSG00000205022 (Human)

Gene Details

poly(A) binding protein, nuclear 1-like (cytoplasmic)

External Links

Gene Match (Ensembl Protein ID: ENSP00000408598, Human)

Protein Percentage 73.13%
CDS Percentage 79.48%
Ka/Ks Ratio 0.21951 (Ka = 0.1694, Ks = 0.7718)

Pabpn1l ENSMUSG00000069867 (Mouse)

Gene Details

poly(A)binding protein nuclear 1-like

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000090747, Mouse)

Protein Percentage 66.54%
CDS Percentage 73.23%
Ka/Ks Ratio 0.23271 (Ka = 0.2309, Ks = 0.9923)

Pabpn1l ENSRNOG00000029558 (Rat)

Gene Details

poly(A)binding protein nuclear 1-like (Pabpn1l), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000050572, Rat)

Protein Percentage 71.54%
CDS Percentage 74.41%
Ka/Ks Ratio 0.17393 (Ka = 0.197, Ks = 1.1327)

Genome Location

Sequence Coding sequence

Length: 810 bp    Location: 776911..779083   Strand: +
>XM_004842662.1
ATGTGGCCCTTCCAGAGCTGCACACTCTTCCCGCCCCCCACCGAGGCCTGGCTCCAGACGGTCTCCTCGGACCCTGAAGCCCAGGGCTGGGGGGCCTGGGCCAGGTCAGAGAAGACCCCTCTGGAGCCAGGAAGTGGGGGTGGAAGGGAGGCTGAGGAAGAGGAGGATGGAGACGCAGGCTTCCCACTGTCCCTGCTGGAGTCCGACAGCCTGGCCAATGGCCCTGAACCTGACCAGGGGCTGGAGGCCATCAAACTGAAGCTGTGGACCATGGAGCAGGCCCAGGGGGCGCCGGAGCCACCCAGCAAACAGGAACTGGCCACGGAGGAAGAGGGCGCCAGGGCCAGGCAACTGCTGAGCCCTGAGACTGTGGGTGGCCCCTTCCCTGTGGCCCCCCGGGAGACGGTGGAGGCCGACCACAGATCCATCTACGTGGGCAATGTGGACTATGGCGGCACGGCCGAGGAGCTGCAGGCCCACTTCCACCCCTGTGGGGAGGTGCACCGCGTCACCATCCTGTGCGACAAGTTCTCCGGCCATCCCAAGGGCTATGCCTACGTGGAGTTCACCACCCAGCTCTCGGCCCAGGCTGCGGTAGAGCTGGATGAGAGCATCTTCCGGGGCCGGGTCATCAAGGTGCTCCCCAAGAGGACCAACTTTCCAGGGATCAGCTCCACGGACCGCGGGGGCCTTCAGGGGACCAGGGTGGTGGCAGCCCCGTGCAGCAGCCTCCAGGGCAGGCCCCGGTTCCGACCACGTGGGCAGGGCAGGGGACGCGGAAGATTCTCCATGTGGTTCTCACCATACTGA

Related Sequences

XP_004842719.1 Protein

Pabpn1l PREDICTED: embryonic polyadenylate-binding protein 2 [Heterocephalus glaber]

Length: 269 aa      View alignments
>XP_004842719.1
MWPFQSCTLFPPPTEAWLQTVSSDPEAQGWGAWARSEKTPLEPGSGGGREAEEEEDGDAGFPLSLLESDSLANGPEPDQGLEAIKLKLWTMEQAQGAPEPPSKQELATEEEGARARQLLSPETVGGPFPVAPRETVEADHRSIYVGNVDYGGTAEELQAHFHPCGEVHRVTILCDKFSGHPKGYAYVEFTTQLSAQAAVELDESIFRGRVIKVLPKRTNFPGISSTDRGGLQGTRVVAAPCSSLQGRPRFRPRGQGRGRGRFSMWFSPY