Details from NCBI annotation

Gene Symbol Vps9d1
Gene Name VPS9 domain containing 1, transcript variant X1
Entrez Gene ID 101698811

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VPS9D1 ENSCPOG00000002331 (Guinea pig)

Gene Details

VPS9 domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002117, Guinea pig)

Protein Percentage 85.58%
CDS Percentage 84.87%
Ka/Ks Ratio 0.20516 (Ka = 0.0958, Ks = 0.4671)

VPS9D1 ENSG00000075399 (Human)

Gene Details

VPS9 domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000374037, Human)

Protein Percentage 80.25%
CDS Percentage 79.46%
Ka/Ks Ratio 0.12107 (Ka = 0.1272, Ks = 1.0508)

Vps9d1 ENSMUSG00000001062 (Mouse)

Gene Details

VPS9 domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113575, Mouse)

Protein Percentage 80.9%
CDS Percentage 79.81%
Ka/Ks Ratio 0.15698 (Ka = 0.124, Ks = 0.7899)

Vps9d1 ENSRNOG00000028904 (Rat)

Gene Details

VPS9 domain containing 1 (Vps9d1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039540, Rat)

Protein Percentage 80.56%
CDS Percentage 80.09%
Ka/Ks Ratio 0.16952 (Ka = 0.1249, Ks = 0.7367)

Genome Location

Sequence Coding sequence

Length: 1977 bp    Location: 267585..277225   Strand: +
>XM_004842622.1
ATGTTACTGAAAAATGATCAGACACCACTGCTCCTGCTCCCACAGGAGCACTGGGCAGGTTTGATGCAACCATTCACCTCTGCTGGCCTGAGCTCCAGCATTTTTCTTCCCCGGACACAGGAGGCATACACAGAATACCTGAGGAGCGTTCACTACATCTCCCAGGTGCTACTGGAGGAAGTGGAATCAACTAAAGAAGCCTGGGAAATAGTGGCCCCTGACACTTCAAAGATGCTGAAGCTGGCGGAGCAGTGTCTGGAGCGGGCCCGGTCAACAGCTGCCAAGCTCGGGAAGACACGCCAGAAGCCAGCGGTACCCATGGCTGCTACGGCGCCACCTATTGGCCGACACCGCAGAGTGTGCTCCGATGAAGGAGGGAAGCTCTCTCCTTTCGTGCCGCCTGAGATCTTCCAGAAGCTTCAGGCAGTCGAGTCCCAAAACTCTAAGAAGGAACTGACACCACTGGAGGAGGCCTCCCTGCAGAACCAGAAACTGAAGGCCACCTACGAGGCCCGGATGGCCCGTCTGGACCCCAGCCAGGCCACACAGAAGACGTCGCTGACCCTGTCTCTGCAGCGGCAGATGATGGAGAACCTGGTGATCGCCAGAGCCCGCGAGGAGACGCTGCAGCGGAAGATGGAGGAACGCCGGCTGCGGCTCCAGGAGGCCGCCAACAGGAAGTTCTGTAGTCAGGTCGCCTTGACCCCCGAGGAGCGAGAACAGAGGGCCCTCTATGCAGCCATCCTTGAGTACGAGCAAGACCATGATTGGCCGAAGCACTGGAGGGCCAAACTCAAGAGGAGCCCAGGGGACCTATCTCTGGTGACCAGCCTGGTCTCACACCTGCTCAGCCTTCCTGACCACCCGATCTCGCAGCTGCTGAAGAAACTGCAGTGTGCAGTGTACAAGGCACTGTATCCCGTTGTGAGCCATGGCGCTATTGGTGCTATGTCTGCCCCAGGATGCTGCTCCCTGCCCTCGGATGCTGACAGGCTGCTGGCTCCTGGGAGCCGGCGCCTCCGCTCCTCCCAGAGCCTGTACTGCATGTTGTCACCCCCAGAGCCCAATGTGGCCCCACAGCCCCAGGATGGACCCCTTGACACCCCCCTACTTCTCCCCGGGACCCTGGAGAGAGGGACAGATGGCAGCCCAGCCAGGCCCCCCTCACCCTTGGTAGATACTTTGTCCTACCTGCCGGACAAGGACAGCTCCTTCGAGGACCTGGAGCAGTTCCTGGCTACATCAGAGAGGTGGAGCTGGGGCTCCGGGCCACAGGTGACACAGAGGGAGCCCTTGCTGGAGTGTCTGAAGAGCACAGTGAAGGACATTCACAATGCCATCGACAGGCTGCTCTCGCTGACCCTCCTGGCCTTTGAGAGCCTGAACACAGCTGCCTGCAAAGACCGTTGCCTGGCCTGCCTCGAGGAGCCCTTCTTCTCCCCACTGTGGCCTCTGCTGCTGGCCCTGTACAGGAGCGTGCACCATGCTCGGGAGGCCGCCCTGAGCAGGAGCATGGAGCTCTACCGGAACGCACCCCCCACAGCCCTGGGTATCCCCACCAAGCTCCTCCCCCAGGAACCGGAGGCCAAGGGGGGTGCCAGCTACCCCTACTGCAGCGCGGCCCAGGAGCTGGGGCTGCTGGTCCTGGAGAGCTGCCCGCAGAAGAAGCTGGGCTGCATCGTGAGGACCCTGCGGGTCATCTGTGTCTGTGCTGAAGACTACTGCCGTGCCCAGGAGCCCACGCCTGAGGCCAGACCCCAAACCCCTGCAGCTGCCATTGGTGCGGATGACTTGCTGCCCATCTTGTCCTTTGTGGTACTGAGGAGCGGCCTTCCCCAGCTGGTATCAGAATGCGCAGCCCTGGAGGAATTCACCCATGAGGGATACCTGATTGGAGAGGAAGGTTACTGCCTGACGTCACTGCAGAGTGCCTTGAACTACGTGGAGCTGCTGCCACAGGGGGCCCTGGGCAAGTAG

Related Sequences

XP_004842679.1 Protein

Vps9d1 PREDICTED: VPS9 domain-containing protein 1 isoform X1 [Heterocephalus glaber]

Length: 658 aa      View alignments
>XP_004842679.1
MLLKNDQTPLLLLPQEHWAGLMQPFTSAGLSSSIFLPRTQEAYTEYLRSVHYISQVLLEEVESTKEAWEIVAPDTSKMLKLAEQCLERARSTAAKLGKTRQKPAVPMAATAPPIGRHRRVCSDEGGKLSPFVPPEIFQKLQAVESQNSKKELTPLEEASLQNQKLKATYEARMARLDPSQATQKTSLTLSLQRQMMENLVIARAREETLQRKMEERRLRLQEAANRKFCSQVALTPEEREQRALYAAILEYEQDHDWPKHWRAKLKRSPGDLSLVTSLVSHLLSLPDHPISQLLKKLQCAVYKALYPVVSHGAIGAMSAPGCCSLPSDADRLLAPGSRRLRSSQSLYCMLSPPEPNVAPQPQDGPLDTPLLLPGTLERGTDGSPARPPSPLVDTLSYLPDKDSSFEDLEQFLATSERWSWGSGPQVTQREPLLECLKSTVKDIHNAIDRLLSLTLLAFESLNTAACKDRCLACLEEPFFSPLWPLLLALYRSVHHAREAALSRSMELYRNAPPTALGIPTKLLPQEPEAKGGASYPYCSAAQELGLLVLESCPQKKLGCIVRTLRVICVCAEDYCRAQEPTPEARPQTPAAAIGADDLLPILSFVVLRSGLPQLVSECAALEEFTHEGYLIGEEGYCLTSLQSALNYVELLPQGALGK