Details from NCBI annotation

Gene Symbol Tcf25
Gene Name transcription factor 25 (basic helix-loop-helix), transcript variant X2
Entrez Gene ID 101697061

Database interlinks

Part of NW_004624746.1 (Scaffold)

For more information consult the page for NW_004624746.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TCF25 ENSCPOG00000025156 (Guinea pig)

Gene Details

transcription factor 25 (basic helix-loop-helix)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017292, Guinea pig)

Protein Percentage 91.69%
CDS Percentage 90.31%
Ka/Ks Ratio 0.14237 (Ka = 0.0455, Ks = 0.3197)

TCF25 ENSG00000141002 (Human)

Gene Details

transcription factor 25 (basic helix-loop-helix)

External Links

Gene Match (Ensembl Protein ID: ENSP00000263346, Human)

Protein Percentage 87.13%
CDS Percentage 85.75%
Ka/Ks Ratio 0.11142 (Ka = 0.0679, Ks = 0.6096)

Tcf25 ENSMUSG00000001472 (Mouse)

Gene Details

transcription factor 25 (basic helix-loop-helix)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000056485, Mouse)

Protein Percentage 88.02%
CDS Percentage 84.96%
Ka/Ks Ratio 0.09743 (Ka = 0.0641, Ks = 0.6575)

Tcf25 ENSRNOG00000017023 (Rat)

Gene Details

Protein Tcf25

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000048508, Rat)

Protein Percentage 88.31%
CDS Percentage 86.05%
Ka/Ks Ratio 0.11362 (Ka = 0.0645, Ks = 0.5677)

Genome Location

Sequence Coding sequence

Length: 2031 bp    Location: 162442..137932   Strand: -
>XM_004842618.1
ATGTCGCGCCGGGCCCTCCGGAGGCTGAGGGGGGAACAGCGTGGACAGGAGCCCCTCGGGCCCGGAGCCCTGCAGTTTGTCCTCCGTGATGACGAAGACGCAGAAGAAGAAGGACCAAAGGGGGGCCCGGGGGTTCGGGTCCCCGGAGGCACAGGGAAAGAGGGCGTTCAAGTCAACAACCGGTTCGAGCTGATAAACATTGAGGACCTTGAGGACGACACTGTGGTAAACGGGGAGAGGTCTGACTGTGTGCGTGCACACTCTATGGCTTCGGGAAACAAAGCAAGGCCCCCACGTGGAGGCCCAGAGACCCAGCGAGATGGGGATGTGATCAAGGCAGTGTTCCCAGAGCAGTCTAATGTAAGTGGCAAACTCCGAAAGAAGAAAAAGAAGCAAAGAAACAAGAAAAACAGCACAGGAGAGACCTCGGAGAATGGGCTGGAAGACATTGACCGAATCCTGGAGAGGATCGAGGATGGCAGTGGGCTCAGCCACCCTGGCCCCCCTCTGCCCAGCTCCAGGAAGCACGTCTTACATGTGGAGCACAGACACTTGAATCCAGACACAGAACTGAAGAGATATTTTGGTGCTCGAGCGGTCCTGGGGGAACAGAGGCCACGGCAGAGACAGCGTGTGTACCCCAAGTGTACATGGCTGACGACCCCCAAGAGTACCTGGCCCCGGTACAGCAAACCAGGTCTGTCCATGCGGCTTCTGGAATCGAAGAAAGGTCTCTCCTTCTTTGCCTTTGAGCATAGCGAGGATTACCAGCAGGCACAGCACAAGTTTCTGGTGGCCGTGGAGTCAATGGAGCCCAACAACATTGTGGTTCTGCTCCAGACAAGCCCCTACCATGTAGACTCGCTCCTGCAGCTCAGCGATGCCTGCCGCTTTCAGGATGACCAGGAGATGGCTCGAGACCTGACAGAGAGAGCACTGTACAGCATGGAGTGCGCCTTCCACCCTTTGTTCAGCCTCACCAGTGGGACTTGCCGGCTGGATTACCGCAGGCCTGAGAACAGGAGCTTCTACCTGGCCCTCTATAAGCAGATGAGCTTCCTGGAGAAACGAGGCTGCCCACGTACTGCGCTGGAGTACTGCAAGCTCATCCTCAGCCTGGAGCCAGATGAGGACCCCCTCTGCATGCTGCTGCTTATTGACCACCTGGCCTTGAGGGCCCGGAACTACGAGTACTTGATCCACCTCTTCCAGGAGTGGGAGGCGCATCGGAACCTGTCCCAGCTCCCAAATTTTGCCTTCTCAGTGTCGTTAGCATATTTCTTGCTGAGTCAGCAGATAGACCTCCCCCAGCAGGAGCTGAACTCCACAAGGGAAAAGGCCTCCACCCTCATCCAGCAGGCGCTCATCATGTTCCCTGGAGTTCTCATGCCCTTGCTGGAGTCCTGCAGTGTGCGGCCCGACGCTGCTGTCTCAGGTCACCACTTCTTTGGCCCCGAGGCTGAGATAAGCCAGCCACCTGCCCTGAGCCAGCTGGTGAGCCTGTACCTTGGGAGGTCTCACTTTCTCTGGAAAGAACCTGCCACCATGAGCTGGCTGGAGGAGAATGTCCGAGAAGTTTTGCGAGCTGTGGACGCAGGGGACCCCACCGTGCAGGCCTGTGAGGGCAGGCGGAAGGTGCTGTACCAGCGTGCACCCAGGAACATCCACCGTCACGTGATCCTCTCGGAGATCAAGGAGGCTGTGGCCGTGCTGCCTCCGGAGGTGACCACGCAGTCTGTGATGGGGTTTGACCCTCTGCCTCCCCTGGACACCATCTACTCCTACGTCCGACCCGAGAGGCTAAGTCCTGTCAGCCATGGAAACACGATCGCCCTCTTCTTCCGGTCACTATTGCCAAACTACACCATGGAGGGAGAGAGGCTGGAGGAAGGAGTGGCTGGAGGTCTGAACCGAAACCAAGGCTTGAACCGGCTGATGCTGGCTGTGCGTGACCTGATGGCCAACTTCCACTTTAACGACATGGAGGTGCCACACGAGGAAAACCCTGAGGGGGAGGCTGACTGGGACTGA

Related Sequences

XP_004842675.1 Protein

Tcf25 PREDICTED: transcription factor 25 isoform X2 [Heterocephalus glaber]

Length: 676 aa      View alignments
>XP_004842675.1
MSRRALRRLRGEQRGQEPLGPGALQFVLRDDEDAEEEGPKGGPGVRVPGGTGKEGVQVNNRFELINIEDLEDDTVVNGERSDCVRAHSMASGNKARPPRGGPETQRDGDVIKAVFPEQSNVSGKLRKKKKKQRNKKNSTGETSENGLEDIDRILERIEDGSGLSHPGPPLPSSRKHVLHVEHRHLNPDTELKRYFGARAVLGEQRPRQRQRVYPKCTWLTTPKSTWPRYSKPGLSMRLLESKKGLSFFAFEHSEDYQQAQHKFLVAVESMEPNNIVVLLQTSPYHVDSLLQLSDACRFQDDQEMARDLTERALYSMECAFHPLFSLTSGTCRLDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLILSLEPDEDPLCMLLLIDHLALRARNYEYLIHLFQEWEAHRNLSQLPNFAFSVSLAYFLLSQQIDLPQQELNSTREKASTLIQQALIMFPGVLMPLLESCSVRPDAAVSGHHFFGPEAEISQPPALSQLVSLYLGRSHFLWKEPATMSWLEENVREVLRAVDAGDPTVQACEGRRKVLYQRAPRNIHRHVILSEIKEAVAVLPPEVTTQSVMGFDPLPPLDTIYSYVRPERLSPVSHGNTIALFFRSLLPNYTMEGERLEEGVAGGLNRNQGLNRLMLAVRDLMANFHFNDMEVPHEENPEGEADWD