Details from NCBI annotation

Gene Symbol Sox18
Gene Name SRY (sex determining region Y)-box 18
Entrez Gene ID 101705099

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SOX18 ENSCPOG00000024123 (Guinea pig)

Gene Details

SRY (sex determining region Y)-box 18

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019534, Guinea pig)

Protein Percentage 94.55%
CDS Percentage 91.55%
Ka/Ks Ratio 0.05091 (Ka = 0.0259, Ks = 0.5095)

SOX18 ENSG00000203883 (Human)

Gene Details

SRY (sex determining region Y)-box 18

External Links

Gene Match (Ensembl Protein ID: ENSP00000341815, Human)

Protein Percentage 91.28%
CDS Percentage 91.1%
Ka/Ks Ratio 0.06336 (Ka = 0.0372, Ks = 0.5871)

Sox18 ENSMUSG00000046470 (Mouse)

Gene Details

SRY-box containing gene 18

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000062759, Mouse)

Protein Percentage 87.09%
CDS Percentage 83.88%
Ka/Ks Ratio 0.05824 (Ka = 0.067, Ks = 1.1507)

Sox18 ENSRNOG00000016248 (Rat)

Gene Details

SRY (sex determining region Y)-box 18 (Sox18), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021790, Rat)

Protein Percentage 87.09%
CDS Percentage 84.16%
Ka/Ks Ratio 0.05739 (Ka = 0.0646, Ks = 1.1265)

Genome Location

Sequence Coding sequence

Length: 1107 bp    Location: 29681049..29679274   Strand: -
>XM_004841125.1
ATGCAGAAATCGCCGCCCGGCTACGGCGCACAGGACGACCCGCCCGCCCGCCGCGACTGTGCATGGGCCCCGGGACCCAGGGCCGCCGCTGAGCCGCGCGGCCTCCCCCCCGCGCCCGCCTCTCCGCCCAGCCCGCCGCACAGCCCCGAGCCCGGGCGCTATGGCCTCAGTTCGGCTGGCCGCGGGGAGCGCCCGACGGCCGACGAGCTGCGCATCCGGCGGCCCATGAATGCCTTCATGGTGTGGGCGAAGGACGAGCGCAAGAGGCTGGCCCAGCAGAACCCGGACCTGCACAACGCAGTGCTCAGCAAGATGCTGGGCAAAGCGTGGAAGGAGCTGAATGCGGCGGAGAAGCGGCCCTTCGTGGAGGAGGCCGAGCGGCTGCGCGTGCAGCACCTGCGCGACCACCCCAACTATAAGTACCGGCCCCGCCGCAAGAAGCAGGCGCGCAAAGCTCGGCGCCTGGAGCCTGGCCTCCTGCTCCCGAGCCTGGCGCCGCCGCCCGAGTCCTACCCTGCGGCGCCCGGTCCGGCCCGCGCCTTCCGCGAGCTGCCGCCGCTGGGCGCCACCGAGCTCGACGGCCTGGGGCTGCCCACGCCCGAGCGCTCGCCGCTGGACGGCCTGGAGCCGGGCGAGGCGGCCTTCTTCCCCCCGCCCGCGGCGCCCGAGGACTGCGCGCTGCGAGCCTTCCGCGCGCCCTACGGGCCCGAGTTGGCCCGGGACCCCGGCGGCTGCTACGGGGCGCCCGTGCCGGAGGCGCTCAGGACCGCGCTCCCCGCCGCGCAGCTCGCCGGCCTCTACTACGGGGCCCTGGGCGCGCCGGGCCCCTATCCTAGCCCGCTGTCGCCGCCGCCCGAGGCCCCACCACTGGAGGGCGCCGAGCCGCTGGCGCCTGCCGCCGACCTGTGGGCCGACGTGGACCTCACCGAGTTCGACCAGTACCTAAACTGCAGCCGGACTCGGCCCGATGCCCCGGCGCTCCCATACCACGTGTCGCTGGCCAAATTGGGCCCGCGTGCCATGTCCTGCCCGGAGGAGAGCAGCTTGATCTCGGCGCTGTCCGACGCCAGCAGCGCTGTCTACTACAGCGCCTGCATCTCCGGCTAG

Related Sequences

XP_004841182.1 Protein

Sox18 PREDICTED: transcription factor SOX-18 [Heterocephalus glaber]

Length: 368 aa      View alignments
>XP_004841182.1
MQKSPPGYGAQDDPPARRDCAWAPGPRAAAEPRGLPPAPASPPSPPHSPEPGRYGLSSAGRGERPTADELRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKARRLEPGLLLPSLAPPPESYPAAPGPARAFRELPPLGATELDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDCALRAFRAPYGPELARDPGGCYGAPVPEALRTALPAAQLAGLYYGALGAPGPYPSPLSPPPEAPPLEGAEPLAPAADLWADVDLTEFDQYLNCSRTRPDAPALPYHVSLAKLGPRAMSCPEESSLISALSDASSAVYYSACISG