Details from NCBI annotation

Gene Symbol Zgpat
Gene Name zinc finger, CCCH-type with G patch domain, transcript variant X1
Entrez Gene ID 101725862

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000014427 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012994, Guinea pig)

Protein Percentage 89.8%
CDS Percentage 90.87%
Ka/Ks Ratio 0.20065 (Ka = 0.0523, Ks = 0.2608)

Zgpat ENSMUSG00000027582 (Mouse)

Gene Details

zinc finger, CCCH-type with G patch domain

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029105, Mouse)

Protein Percentage 83.66%
CDS Percentage 82.15%
Ka/Ks Ratio 0.10628 (Ka = 0.0937, Ks = 0.8817)

Zgpat ENSRNOG00000014235 (Rat)

Gene Details

zinc finger, CCCH-type with G patch domain (Zgpat), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019084, Rat)

Protein Percentage 84.52%
CDS Percentage 81.48%
Ka/Ks Ratio 0.09638 (Ka = 0.0923, Ks = 0.9575)

Genome Location

Sequence Coding sequence

Length: 1530 bp    Location: 29355915..29390539   Strand: +
>XM_004841089.1
ATGGACGAAGACAGCCTAGAGACGGCCCTCCAGACCTACCGTGGCCAGCTGCGGCAGGTGGAACTGGCCCTGGGTGCGGGCCTGGATGCCTCCGAGCAGGCGGACTTGCGCCAGCTGCAGGGCGACTTGAAGGAGCTGATCGAGCTCACCGAGGCCAGCCTGGTGTCTGTCAGGAAGAGCAAGCTGCTGGCCACGCTGGACCAAGAGTGCCCACCCCAGGAGGACGCCGAATACCTGGAGTTCCAGAAGGCCATTGCTGAGGTCCCGGAGGTGCCCACCACTCCCAGGGCAGACCTAGAGACCGGCCATGAGAGAGAGGCAGGACCAGAACCTACTGAACCTGGGCGGGAAGAGGAGGGAGAGGAGGAAGAACTGAACGGAGCGAAGGTGAACGCCCCCTACTACAGTGCATGGGGCACCTTGGAGTATCACAATGCCATGGTGGTGGGCACCGAGGAGACAGAGGATGGAACGGCCTGCGTCCGCGTGCTCTACCTGTACCCCACTCACAAGTCTCTGAAGCCGTGCCCATTCTTCCTAGAGGGAAAGTGCCGCTTCAAGGAGAACTGCCGATTCTCCCATGGGCAGGTGGTCTCTGTCGATGAGCTGCGCCCTTTCCAGGACCCAGACCTGAGCTTGCTGCAGGCCGGCTCTCCATGTCTGGCCAAGCACCACGATGGCCTCTGGCACCCGGCGCGAATCACTGATGTGGACAATGGCTACTACACAGTCAAATTTGACTCCCTGCTGCTGAAAGAGGCCGTGGTGGAGGGGGACAGCATCCTGCCCCCACTTCGGACAGAGGCTGAAGAGTCCTCTGACTCAGACAGTGGCGATCTGGGTGACTCCAGCTATGCCAGAGTAGTGGAATCAGGCCCTGTGGATACTGGGACCAGTAGTTCCGCCTTCGCTGGCTGGGAGGTGCACACACGTGGCATTGGATCTAGGCTCCTCGCCAGAATGGGCTATGAGTTTGGCAAAGGTCTGGGCCGACATGCAGAAGGCCGGGTGGAGCCCATCCATGCTGTGGTGTTGCCTCGAGGAAAGTCTCTAGACCAATGCGCAGAGACTCTGCAAAAGAGGACCAAGGAAGGGCAGGATGGTGCCAGTAGGCCCCCAAGGTGCCGGAGGAGGAAGGGTAGGCCTGCGGGCCACCTGCCCCCGAGGAATGTATTTGACTTCCTGAATGAAAAGCTGCAAAGCCAGGCTCCTAGGGACCTGGAGGCTGGGGTGGATCTCCCCAGAGGAAAGAAAACCAAGGACATGTACCACGCCAGCAAGAGTGCCAAGCAGGCCCTGAACCTGCAGCTCTTCCAGACTGAGGAAAAGATTGAGCGGACCCAGCGAGACATCCGGGGCATCCAGGAGGCCCTCACTCGGAATGCTGGCCGGCACAGTGTGGCAGCAGCCCAGCTGGAGGAGAAGCTGGCGGGAGCCCAGCGGCAGCTGGGGCAGCTCCGGGCCCAGGAGGCAGGCTTGCAGCGGGAGCAGCGGAAGGCAGACACCCACAGGAAGATGACAGAATTCTAG

Related Sequences

XP_004841146.1 Protein

Zgpat PREDICTED: zinc finger CCCH-type with G patch domain-containing protein isoform X1 [Heterocephalus glaber]

Length: 509 aa     
>XP_004841146.1
MDEDSLETALQTYRGQLRQVELALGAGLDASEQADLRQLQGDLKELIELTEASLVSVRKSKLLATLDQECPPQEDAEYLEFQKAIAEVPEVPTTPRADLETGHEREAGPEPTEPGREEEGEEEELNGAKVNAPYYSAWGTLEYHNAMVVGTEETEDGTACVRVLYLYPTHKSLKPCPFFLEGKCRFKENCRFSHGQVVSVDELRPFQDPDLSLLQAGSPCLAKHHDGLWHPARITDVDNGYYTVKFDSLLLKEAVVEGDSILPPLRTEAEESSDSDSGDLGDSSYARVVESGPVDTGTSSSAFAGWEVHTRGIGSRLLARMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSLDQCAETLQKRTKEGQDGASRPPRCRRRKGRPAGHLPPRNVFDFLNEKLQSQAPRDLEAGVDLPRGKKTKDMYHASKSAKQALNLQLFQTEEKIERTQRDIRGIQEALTRNAGRHSVAAAQLEEKLAGAQRQLGQLRAQEAGLQREQRKADTHRKMTEF