Details from NCBI annotation

Gene Symbol Lime1
Gene Name Lck interacting transmembrane adaptor 1, transcript variant X3
Entrez Gene ID 101724971

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000019294 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018734, Guinea pig)

Protein Percentage 73.98%
CDS Percentage 82.82%
Ka/Ks Ratio 0.48719 (Ka = 0.1599, Ks = 0.3282)

Lime1 ENSMUSG00000090077 (Mouse)

Gene Details

Lck interacting transmembrane adaptor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000045010, Mouse)

Protein Percentage 50.0%
CDS Percentage 63.52%
Ka/Ks Ratio 0.55939 (Ka = 0.447, Ks = 0.7991)

Lime1 ENSRNOG00000049336 (Rat)

Gene Details

Lck interacting transmembrane adaptor 1 (Lime1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019545, Rat)

Protein Percentage 49.61%
CDS Percentage 63.39%
Ka/Ks Ratio 0.55541 (Ka = 0.4489, Ks = 0.8083)

Genome Location

Sequence Coding sequence

Length: 837 bp    Location: 29391961..29393459   Strand: +
>XM_004841088.1
ATGCTGGCAGAAACGTCCCTGCTGAGACAGACTCATCTCTGCCCCCTCAGCAAGTCTGACACCAGGCTGCATGAGCTGCACCGCGGTACCCATGGCAGCAAAGGTGAGGTGACTACCAGAAGGACACATGGGGAGTGGCTGGCTGCAGCTTGGGACCACACCTGCTGTCCACCCCTAATGGCCTCTGGCCTGACCTTACCCATAGCCCTGAGGCCTGCCAGCATGGATCTCCTGCACCCACACTGGCTAGAAGTTTCCAGGGGTAGCGCCAGACCACTGGCAGCCCCCTCTGCCTTCCCACGTCAGCAGCTGCCGGGGCCCCCATCTGCGACTGCCTTCACACTGTCCACTGGTCCTGAGGCCACCTATTCTAATGTGGGGCTGGCTGCCATCCCTAGAGCTAGCCTGGCTGCCAGCCCTGTGGTATGGGCAGGGACACGGCTGACCACTGGCTGTGACAGGCCAGGGCACTGGGCCAGACCTGTACTGGCTGAGTATGCCTCCATCCAGAAGCTCAGAGGGTCAGATCCGGGCCCCCAAGAACTGCAGCAAGGGAAGACTGAGGTGACCCCAGCTGCTCAGGTGGACATCCTGTACTCCAGGGTCTGCAAGCCTAGAAACAGGGACGCAGGGCCCGCCACAGACCCACCGGGCCGTGAGGGCACAGGAGCAGTTCTGACCCTGGAGACTGGCTTAACCTATGAACCGCTCCCTCCTAGGGGCCTGGACATGGACAGCAATCCCCTGGAAAATGTGTATGAAAGCATCCAGGATGTGGGGACCCCTGAAAGTCCAGAGCCCTCCATTCTGCCTATTAGCATAAGCGGACATATGTAG

Related Sequences

XP_004841145.1 Protein

Lime1 PREDICTED: lck-interacting transmembrane adapter 1 isoform X3 [Heterocephalus glaber]

Length: 278 aa     
>XP_004841145.1
MLAETSLLRQTHLCPLSKSDTRLHELHRGTHGSKGEVTTRRTHGEWLAAAWDHTCCPPLMASGLTLPIALRPASMDLLHPHWLEVSRGSARPLAAPSAFPRQQLPGPPSATAFTLSTGPEATYSNVGLAAIPRASLAASPVVWAGTRLTTGCDRPGHWARPVLAEYASIQKLRGSDPGPQELQQGKTEVTPAAQVDILYSRVCKPRNRDAGPATDPPGREGTGAVLTLETGLTYEPLPPRGLDMDSNPLENVYESIQDVGTPESPEPSILPISISGHM