Details from NCBI annotation

Gene Symbol Tcfl5
Gene Name transcription factor-like 5 (basic helix-loop-helix), transcript variant X2
Entrez Gene ID 101707900

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TCFL5 ENSCPOG00000020307 (Guinea pig)

Gene Details

transcription factor-like 5 (basic helix-loop-helix)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017338, Guinea pig)

Protein Percentage 88.85%
CDS Percentage 89.38%
Ka/Ks Ratio 0.24061 (Ka = 0.0672, Ks = 0.2794)

TCFL5 ENSG00000101190 (Human)

Gene Details

transcription factor-like 5 (basic helix-loop-helix)

External Links

Gene Match (Ensembl Protein ID: ENSP00000334294, Human)

Protein Percentage 87.84%
CDS Percentage 88.96%
Ka/Ks Ratio 0.21767 (Ka = 0.0664, Ks = 0.3051)

Tcfl5 ENSMUSG00000038932 (Mouse)

Gene Details

transcription factor-like 5 (basic helix-loop-helix)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000040611, Mouse)

Protein Percentage 89.98%
CDS Percentage 89.84%
Ka/Ks Ratio 0.16634 (Ka = 0.0519, Ks = 0.3122)

Tcfl5 ENSRNOG00000023770 (Rat)

Gene Details

Protein Tcfl5

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029580, Rat)

Protein Percentage 90.23%
CDS Percentage 89.77%
Ka/Ks Ratio 0.16709 (Ka = 0.0514, Ks = 0.3079)

Genome Location

Sequence Coding sequence

Length: 1458 bp    Location: 28628777..28610653   Strand: -
>XM_004841027.1
ATGTCAGGCCCCGGGCCGCGGGAGCCGTCGCCTGAGGCGGGCGCGGCGGGCGCGGCGGGCGGCGACGTGGGCCCCGAGGACGCGGGCGGCGGGGACGCGGCGCTGGGCGAGTCGGGGCTGAGCTTCACGACCACCGACCTGAGCCTGGTGGAGATGACGGAGGTGGAGTACACGCAGCTGCAGCACATCCTCTACTCGCACATGGAGGCGGCCGACGGCGAGCTCGAGGCGCGCCTCGGCTCTGCGCTGCTGGGCGGCCCAGGCGCAGGCGCGGCAGGCGCGCAGTCCTCCGCGCCGCCTGGGTACCCGGTGCTGTGCCCGCCACTGGCGGCCGACGCCCCCTGCCTGGGTCACGTTGACTTGCAGGAGCTGCGCATGATGCTGCTCGGCGAGGCGGGCGCGGCCGAGAAGATGCCAGGCGGCTTGGACGGGGGGCGGGCGCGGGCTCGGACGGAGGGCGGCGCGGCCAAGGAGGGCGCGGGCGCCGCGGGGCCCGAGGGCGCGCCCGAGGCCCGGGCCAAGCCCGCCGTGCGCGTCCGCCTGGAGGACCGCTTCAGCAGCATCCCGGCCGAGCCCCCCGAGCCCGGCGTGGCGCTCAACAATTTGGTAACTCTTATTCGACATCCATCTGAATTAATGAATGTTCCTCTTCATCAACAACAAAACAAATGTACAACATTAGTGAAAAATAAAACTACTGCTGCGACCCCTGCTTTGCAGTTCACCTACCCACTGTTCACAAGTTCGTGCTCTACTGGTGGAAATTCTAGCCTTTCACAGACACAGAGTTCTAGTAATTCATCTAATGTACTTGAAGCTGCCAAGCACCAGGACATCGGACTGCCAAGAGCATTTTCTTTCTGTTACCAACAGGAGATTGAATCTACTAAACAGACTTTAGGTAGCCGAAACAAAACTTTGCCTGAGCAGGTTTGGATTAAAGTGGGAGAAGCGCTATGTAAGCAAGCAATAAATAAGAGGAATCGGAGTAGAATACGTCAGTTGGACACAAGTATAGAACGAAGAGCCCTTGGAGAGATTCAGAATGTGGGCGAAGGCTCTACAGCCACACAGGGCACCTGGCAGTCCTCGGAGTCCTCACAGTCAAACCTGGGGGACCAGACCCAGAGCGGGCACCAGGGAGGAAGGTCTCAGCGTAGGGAGAGGCATAACCGAATGGAAAGAGATAGAAGGCGCAGAATCCGCATTTGCTGTGATGAGCTGAATCTTTTAGTTCCCTTCTGCAATGTGGAGACAGATAAGGCAACAACCCTTCAGTGGACCACAGCGTTCCTGAAGTACATCCAGGAAAGACATGGGGATTCTCTTAAAAAGGAATTTGAGAGTGTGTTTTGCGGTAAAACTGGCAGAAGGCTAAAGCTGAGCAGACCGGACTCCTTGGTGACCTGCCCTGCACAGGGGAGTCTGCAGAACAACCCCGCAGTGGAGACCAAGTGA

Related Sequences

XP_004841084.1 Protein

Tcfl5 PREDICTED: transcription factor-like 5 protein isoform X2 [Heterocephalus glaber]

Length: 485 aa      View alignments
>XP_004841084.1
MSGPGPREPSPEAGAAGAAGGDVGPEDAGGGDAALGESGLSFTTTDLSLVEMTEVEYTQLQHILYSHMEAADGELEARLGSALLGGPGAGAAGAQSSAPPGYPVLCPPLAADAPCLGHVDLQELRMMLLGEAGAAEKMPGGLDGGRARARTEGGAAKEGAGAAGPEGAPEARAKPAVRVRLEDRFSSIPAEPPEPGVALNNLVTLIRHPSELMNVPLHQQQNKCTTLVKNKTTAATPALQFTYPLFTSSCSTGGNSSLSQTQSSSNSSNVLEAAKHQDIGLPRAFSFCYQQEIESTKQTLGSRNKTLPEQVWIKVGEALCKQAINKRNRSRIRQLDTSIERRALGEIQNVGEGSTATQGTWQSSESSQSNLGDQTQSGHQGGRSQRRERHNRMERDRRRRIRICCDELNLLVPFCNVETDKATTLQWTTAFLKYIQERHGDSLKKEFESVFCGKTGRRLKLSRPDSLVTCPAQGSLQNNPAVETK