Sequence details NCBI ID: XM_004841019.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slco4a1
Gene Name solute carrier organic anion transporter family, member 4A1, transcript variant X4
Entrez Gene ID 101704872

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLCO4A1 ENSCPOG00000015749 (Guinea pig)

Gene Details

solute carrier organic anion transporter family, member 4A1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014202, Guinea pig)

Protein Percentage 84.51%
CDS Percentage 87.61%
Ka/Ks Ratio 0.18252 (Ka = 0.0825, Ks = 0.4518)

SLCO4A1 ENSG00000101187 (Human)

Gene Details

solute carrier organic anion transporter family, member 4A1

External Links

Gene Match (Ensembl Protein ID: ENSP00000217159, Human)

Protein Percentage 75.25%
CDS Percentage 81.62%
Ka/Ks Ratio 0.19767 (Ka = 0.1396, Ks = 0.706)

Slco4a1 ENSMUSG00000038963 (Mouse)

Gene Details

solute carrier organic anion transporter family, member 4a1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000045023, Mouse)

Protein Percentage 78.57%
CDS Percentage 80.21%
Ka/Ks Ratio 0.12355 (Ka = 0.1212, Ks = 0.9807)

Slco4a1 ENSRNOG00000021870 (Rat)

Gene Details

solute carrier organic anion transporter family, member 4a1 (Slco4a1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030414, Rat)

Protein Percentage 78.2%
CDS Percentage 79.75%
Ka/Ks Ratio 0.13261 (Ka = 0.1276, Ks = 0.9624)

Genome Location

Sequence Coding sequence

Length: 2274 bp    Location: 28450478..28470018   Strand: +
Raw sequence   
>XM_004841019.1
ATGCCAGCCCTCCGGCCGGCCGCGGGAACAGCGAACAAACGGGCAGCTGGAATTCCTCTCGGCCACTTCTGCCAGTCCCACTGTCACCCTGCTTCCAAGGCCTCCCCACCAGGCCCGGAGATGCCCCAGCAAGCGCTGGGGGACACGCGCTTCCCCCTGATGCCCCAGCTCTTCAACAGCACCCACTTGGCTGTTGAAAATGGGCTTGACCACAGCCCCCTGGGCAGCAGGGACTCCCCAGGCTCTGAGCGCTCCACCACCCACAGCCCCCTGGACTCCTGCAGCCAGCCCCTGTGCCAGCCCCGGACAGAGAAGCACAACAGCCAGGCGGCTCCGCAGGTGCAGTACGTTTCAGTGGGGCCACCAGACACAGCGTGTGGCTGGCGAGGCTTCACCCCAGAGTGCCTGCAGGTCTTCAACACCCCCAAGGGCTTCCTGTTCTTCCTGTGTGCAGCCTCCTTCCTGCAGGGCATGACGGTGAACGGCTTCATCAACACGGTCATCACCTCCATCGAGCGGCGCTATGACCTGCACAGCTACCAGAGCGGGCTCATCGCCAGCTCCTACGACATTGCCGCCTGTCTCTGCCTTACCTTTGTCAGCTACTTCGGGGGCAGTGGACACAAGCCGCGCTGGCTGGGCTGGGGCGTGCTGCTCCTGGGCGCCGGCTCGCTGGTGTTCGCCCTGCCCCACTTCATCTCGGGCCGCTATGAGGCGGAGGTGGACGAAGGGACCGGGATGTGCCCGGCCAACCAGAGCGTGGTGTGTGCTGACAGCTCCTCGGGCCTGTCCCACTACCGGCTGGTCTTCATGCTGGGCCAGTTCCTGCACGGCGTGGGCGCCACGCCCCTGTATACCCTGGGCGTCACCTACCTGGACGAGAATGTCAAGTCCAGCTACTCGCCCGTCTACATTGCTGTCTTTTACACTGCAGCCATCCTGGGCCCTGCTGCTGGCTATCTGATCGGAGGCGCCATGCTGAATGTTTACACGGAAGTGGGCCGGCGGACCCACTTGACCCCCGAGAGCCCACTGTGGGTTGGTGCCTGGTGGATCGGCTTCCTGGGCGCAGGGGCAACAGCCTTGATCATCGCTGTCCCCATCCTTGGCTACCCCCGACAGCTGCCAGGCTCCCAGCGCTATGTCATCATGAGAGCAGCAGAGACACAGCAGCTGAAAGAGCGCAGCCACAAGACAGCTGGCAGCCTGGCCTTGGGGAAGACAGTCAGAGACCTGCCGCTCTCCATCTGGCTCCTCCTGAAGAATCCCACATTCATCCTACTCTGTCTGGCGGGGGCCACTGAGGCCACGCTCATTGCCAGCATGTCCACGTTTGGCCCCAAGTTCTTGGAGGCCCAGTTCAGCCTCAGTGCCTCAGAAGCGGCCTCTTTGTTCGGGTACCTGGTGGTGCCGGCAGGCGGTGGCGGCACACTCTTGGGCGGCTTCCTGGTGAACAGGTTTAAGCTCCGAGGCCCCGGGATCGTCAGGTTCTGCCTGCTCTGCACCCTGACCAGCCTGCTTGCCTTCTTCGTCTTCCTCACACACTGCCCCAACGTGCCCATGGCAGGCGTGACCACAGGCTACACCAGCCTCCTGCCTGAAGGCCACCTGAACCTGACGGCCACCTGCAATGAGCACTGCAGCTGCCAGCCCGAGCACTACCGCCCTGTGTGCGACGCGAACGGCACCATGTACTACTCCCCCTGCCACGCAGGGTGCCTGGGGCCCGCAGAGACGGGCTGGGATGGCCAGAAGGTGTACCAAGGCTGTAGCTGTGTCCCTGCGAGTTTGGGCCAGGCCACTGCAGGGAAATGCACTTCAACTTGTCAGAGAAAGCCCCTCCTTCTGGTTCTCGTGTTCGCTGTAATTATCTTTACATTCCTCAGCAGCATTCCTGCGCTGACGGCGACTCTACGGTGTGTCCTGGACCAGCAGAGGTCCTTCGCCCTGGGGATCCAGTGGATCGTGGTTAGAACACTAGGCAGCATCCCGGGACCCATCGCCTTTGGCTGGGTGATCGACAAGGCCTGCCTCCTATGGCAAAACCAGTGCAGCCACCAGGGCTCCTGCTTCGTGTACCAGAACGCAGCCATGAGCCGCTATATACTCGTCGTGGGGCTCGTGTACAAGGTGCTGGGCTTCCTCTTCTTTGCTGCCGCCTGCTTCCTGTACGAGTCTCCGTCCGGGCCCTTGGCCGACCGGGCCGCCTCCCTGCCCAGCCAGTCATCAGCCTCCGAGGGCCCCTCGGACCTCCAGCTGCAGAGTGCCATCTGA

Related Sequences

XP_004841076.1 Protein

Slco4a1 PREDICTED: solute carrier organic anion transporter family member 4A1 isoform X4 [Heterocephalus glaber]

Length: 757 aa      View alignments
>XP_004841076.1
MPALRPAAGTANKRAAGIPLGHFCQSHCHPASKASPPGPEMPQQALGDTRFPLMPQLFNSTHLAVENGLDHSPLGSRDSPGSERSTTHSPLDSCSQPLCQPRTEKHNSQAAPQVQYVSVGPPDTACGWRGFTPECLQVFNTPKGFLFFLCAASFLQGMTVNGFINTVITSIERRYDLHSYQSGLIASSYDIAACLCLTFVSYFGGSGHKPRWLGWGVLLLGAGSLVFALPHFISGRYEAEVDEGTGMCPANQSVVCADSSSGLSHYRLVFMLGQFLHGVGATPLYTLGVTYLDENVKSSYSPVYIAVFYTAAILGPAAGYLIGGAMLNVYTEVGRRTHLTPESPLWVGAWWIGFLGAGATALIIAVPILGYPRQLPGSQRYVIMRAAETQQLKERSHKTAGSLALGKTVRDLPLSIWLLLKNPTFILLCLAGATEATLIASMSTFGPKFLEAQFSLSASEAASLFGYLVVPAGGGGTLLGGFLVNRFKLRGPGIVRFCLLCTLTSLLAFFVFLTHCPNVPMAGVTTGYTSLLPEGHLNLTATCNEHCSCQPEHYRPVCDANGTMYYSPCHAGCLGPAETGWDGQKVYQGCSCVPASLGQATAGKCTSTCQRKPLLLVLVFAVIIFTFLSSIPALTATLRCVLDQQRSFALGIQWIVVRTLGSIPGPIAFGWVIDKACLLWQNQCSHQGSCFVYQNAAMSRYILVVGLVYKVLGFLFFAAACFLYESPSGPLADRAASLPSQSSASEGPSDLQLQSAI