Details from NCBI annotation

Gene Symbol Ss18l1
Gene Name synovial sarcoma translocation gene on chromosome 18-like 1
Entrez Gene ID 101698052

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SS18L1 ENSCPOG00000002513 (Guinea pig)

Gene Details

synovial sarcoma translocation gene on chromosome 18-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002289, Guinea pig)

Protein Percentage 92.95%
CDS Percentage 89.99%
Ka/Ks Ratio 0.07224 (Ka = 0.0443, Ks = 0.6129)

SS18L1 ENSG00000184402 (Human)

Gene Details

synovial sarcoma translocation gene on chromosome 18-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000333012, Human)

Protein Percentage 92.42%
CDS Percentage 89.9%
Ka/Ks Ratio 0.03491 (Ka = 0.0317, Ks = 0.907)

Ss18l1 ENSMUSG00000039086 (Mouse)

Gene Details

synovial sarcoma translocation gene on chromosome 18-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041288, Mouse)

Protein Percentage 94.78%
CDS Percentage 89.8%
Ka/Ks Ratio 0.0301 (Ka = 0.023, Ks = 0.7632)

Ss18l1 ENSRNOG00000008437 (Rat)

Gene Details

synovial sarcoma translocation gene on chromosome 18-like 1 (Ss18l1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011306, Rat)

Protein Percentage 89.03%
CDS Percentage 85.54%
Ka/Ks Ratio 0.06741 (Ka = 0.0636, Ks = 0.9439)

Genome Location

Sequence Coding sequence

Length: 1209 bp    Location: 28017294..28052409   Strand: +
>XM_004840993.1
ATGTCCGTGGCCTTCGCATCCGCCCGTCCGAGAGCCAAAGGGGAGGTCACGCAGCAAACCATCCAGAAGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGACTACCAGAGCAAGGGCAAGACGGCCGAGTGCACACAGTACCAGCAGATACTGCACCGGAACCTGGTCTACCTGGCCACCATAGCGGACTCCAACCAGAATATGCAGTCCCTGCTCCCTGCCCCACCAACCCAGAACATGAACCTGGGCCCCGGAGGGCTGAGTCAGAGCGGCTCCAGCCAGGGCCTGCACCCCCAGGGCAGTCTCAGCGACGCCATCAGCACTGGCCTGCCCCCGGCCTCCCTCATGCAAGGCCAGATTGGCAATGGTCCAAACCATGTGTCCATGCAGCAGACGGCACAAAGCACACTTCCTACGACCTCCATGAGCATGTCGGGTAGTGGCCACGGCACTGCGCCTGGCTACAGCCACTCGGGACCAGCCTCGCAGAGTGTCCCCATGCAGGGCCAGGGTGCCATCGGCAACTACGTGTCTCGGACCAACATCAATATGCAGTCCAATCCAGTTTCCATGATGCACCAGCAGGCGGCCACATCCCACTACAACTCAGCACAGGGCGGAAGCCAGCACTACCAGGGCCAGTCATCCATCGCCATGATGGGCCAGGGTGGCCAGGGGAGCAGCATGATGGGGCAGCGGCCCATGGCACCCTACCGGGCCTCCCAGCAAGGCTCTTCCCAGCAGTACCTGGGCCAAGAGGAGTACTACAGTGAGCAGTATAGCCACAGCCAGGGTGCCTCGGAGCCGATGAGCCAGCAGTACTACCCGGACGGCCATGGCGATTATGCCTACCAGCAGTCATCCTACACGGAGCAGAGCTATGACCGCTCGTTCGAGGAGTCCACACAGCACTACTACGAGGGGGGGAACTCCCAGTACAGCCAGCAGCAGGCCGGGTACCAGCAGGGCACAGCCCAGCAGCAGGCATACCCCCAGCAGCAGTACCCCAGCCAGCAGAGCTACCCAGGGCAGCAGCAAGGCTACGGGCCTGCCCAGGGCGCCCCCTCGCAGTACTCCAGCTACCAGCAAGGACAAGGCCAGCAGTATGGAAGCTACAGAGCGTCGCAGTCGGGACCCTCTGCCCAGCAGCAGCGCCCCTACGGTTATGAGCAGGGCCAGTATGGAAATTACCAGCAATAA

Related Sequences

XP_004841050.1 Protein

Ss18l1 PREDICTED: calcium-responsive transactivator [Heterocephalus glaber]

Length: 402 aa      View alignments
>XP_004841050.1
MSVAFASARPRAKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGGLSQSGSSQGLHPQGSLSDAISTGLPPASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSMSGSGHGTAPGYSHSGPASQSVPMQGQGAIGNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMGQGGQGSSMMGQRPMAPYRASQQGSSQQYLGQEEYYSEQYSHSQGASEPMSQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQHYYEGGNSQYSQQQAGYQQGTAQQQAYPQQQYPSQQSYPGQQQGYGPAQGAPSQYSSYQQGQGQQYGSYRASQSGPSAQQQRPYGYEQGQYGNYQQ