Sequence details NCBI ID: XM_004840992.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Psma7
Gene Name proteasome (prosome, macropain) subunit, alpha type, 7, transcript variant X2
Entrez Gene ID 101697423

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMA7 ENSCPOG00000014168 (Guinea pig)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 7

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012764, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 93.79%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.2905)

PSMA7 ENSG00000101182 (Human)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 7

External Links

Gene Match (Ensembl Protein ID: ENSP00000359910, Human)

Protein Percentage 99.6%
CDS Percentage 94.76%
Ka/Ks Ratio 0.00866 (Ka = 0.0019, Ks = 0.2186)

Psma7 ENSMUSG00000027566 (Mouse)

Gene Details

proteasome (prosome, macropain) subunit, alpha type 7

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029082, Mouse)

Protein Percentage 99.19%
CDS Percentage 91.26%
Ka/Ks Ratio 0.00828 (Ka = 0.0037, Ks = 0.4442)

Psma7 ENSRNOG00000008630 (Rat)

Gene Details

proteasome (prosome, macropain) subunit, alpha type 7 (Psma7), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011724, Rat)

Protein Percentage 99.19%
CDS Percentage 91.67%
Ka/Ks Ratio 0.00899 (Ka = 0.0037, Ks = 0.4116)

Genome Location

Sequence Coding sequence

Length: 747 bp    Location: 28017055..28011058   Strand: -
Raw sequence   
>XM_004840992.1
ATGAGCTACGACCGCGCCATCACCGTCTTCTCGCCCGACGGCCACCTCTTCCAAGTGGAGTACGCGCAGGAGGCCGTCAAGAAGGGCTCGACCGCGGTTGGTGTTCGAGGAAGGGACATTGTTGTTCTTGGTGTGGAAAAGAAATCAGTGGCTAAACTACAAGATGAAAGAACTGTGCGAAAGATCTGTGCTTTGGATGACAACGTCTGCATGGCCTTTGCAGGCCTCACTGCTGACGCAAGGATCGTCATCAATAGGGCCCGGGTGGAGTGCCAGAGCCACCGCCTGACTGTGGAGGACCCGGTCACTGTGGAGTACATCACCCGCTACATTGCCAGTCTGAAGCAGCGTTATACGCAGAGCAATGGGCGCAGGCCTTTTGGCATCTCTGCCCTCATCGTGGGTTTTGACTTCGATGGCACCCCTCGACTCTATCAGACTGACCCCTCTGGCACATACCATGCCTGGAAGGCCAATGCCATAGGCAGGGGTGCCAAGTCAGTGCGTGAGTTCCTGGAGAAGAACTATACCGATGAAGCCATTGAGACAGATGATCTAACCATCAAGCTGGTGATCAAGGCACTCCTGGAAGTGGTCCAGTCAGGTGGCAAAAACATTGAACTTGCTGTCATGAGGAGAGATCAGCCTCTCAAGATTCTAAATCCTGAAGAAATTGAGAAATATGTTGCTGAAATTGAAAAAGAAAAAGAAGAAAATGAAAAGAAGAAACAAAAGAAAGCATCGTGA

Related Sequences

XP_004841049.1 Protein

Psma7 PREDICTED: proteasome subunit alpha type-7 isoform X2 [Heterocephalus glaber]

Length: 248 aa      View alignments
>XP_004841049.1
MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIEKYVAEIEKEKEENEKKKQKKAS