Details from NCBI annotation

Gene Symbol Lsm14b
Gene Name LSM14B, SCD6 homolog B (S. cerevisiae), transcript variant X3
Entrez Gene ID 101696573

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LSM14B ENSG00000149657 (Human)

Gene Details

LSM14B, SCD6 homolog B (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000279068, Human)

Protein Percentage 94.81%
CDS Percentage 90.56%
Ka/Ks Ratio 0.07028 (Ka = 0.0258, Ks = 0.3671)

Lsm14b ENSMUSG00000039108 (Mouse)

Gene Details

LSM14 homolog B (SCD6, S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000055036, Mouse)

Protein Percentage 93.77%
CDS Percentage 89.35%
Ka/Ks Ratio 0.07256 (Ka = 0.03, Ks = 0.4134)

Lsm14b ENSRNOG00000008877 (Rat)

Gene Details

Protein Lsm14b

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000051934, Rat)

Protein Percentage 93.25%
CDS Percentage 89.09%
Ka/Ks Ratio 0.0761 (Ka = 0.0324, Ks = 0.4255)

Genome Location

Sequence Coding sequence

Length: 1158 bp    Location: 27998837..28010543   Strand: +
>XM_004840990.1
ATGAGCGGCTCCTCGGGTACCCCGTATCTGGGCAGCAAGATCAGCCTCATTTCCAAGGCACAGATTCGCTACGAGGGCATTCTCTACACCATCGACACCGACAACTCCACCGTGGCTCTCGCCAAAGTGAGGTCCTTTGGTACTGAAGACCGTCCCACAGATAGGCCTGCTCCCCCAAGAGAGGAAATTTATGAGTACATCATTTTTCGGGGAAGTGATATTAAAGATATTACTGTATGTGAACCTCCGAAAGCTCAGCACACACTCCCTCAGGATCCTGCTATCGTTCAGTCTTCCTTGGGCTCTGCCTCTGCCTCGCCCTTCCAGCCACATGTGCCTTATAGCCCCTTCAGAGGAATGCCGCCCTATGGCCAGCTGGCAGCCAGCTCCCTGCTCAGCCAGCAGTATGCATCTTCCTTAGGTCTAGGAGCTGGTTTTCCATCTGCCCCAGTTGGCAAGAGCCCCATGGTGGAACAGGCTGTCCAGACTGGTTCTGTTGATAACCTGAATGCCAAAAAGCTGTTACCTGGCAAGGGCACCTCAGGGATGCAGCTCAGCGGTCGCCAGGCCCACCCAAGCAGCAAGACCACTGGTGATATAGTCCAGCCAGCAGCTGTGCACACTCAAGGGCAGGTGAATGATGAGAACAGAAGACCTCAGAGGAGGCGGTCAGGGAATCGGCGAACAAGGAATCGCTCCAGAGGGCAAAACCGTCCTACTAATGTCAAGGAAAACACAATCAAGTTTGAGGGAGACTTTGATTTTGAGAGTGCAAATGCCCAGTTCAACCGAGAAGAACTGGACAAAGAATTCAAGAAGAAACTAAATTTTAAAGAGGACAAGGCTGAGAAGGGGGAAGAGAAGGACCAGGCTGTGGTCACTCCGAGTGATGAAACTCCTGCTGAGGAAGACCTTCTGGGGCCCAACTGCTACTATGACAAATCCAAGTCCTTCTTCGACAATATCTCTTCTGAACTCAAGACCAGTTCTAGGCGGACAACATGGGCTGAAGAGAGGAAGCTGAATACAGAGACCTTTGGGGTATCAGGGAGGTTCCTTCGAGGCCGCACTTCCCGTGGAGGATTCCGAGGAGGCAGGGGCAATGGGACCACTCGGCGCAACCCTACTTCCCACAGAGCCGGGACTGGCAGGGTGTAA

Related Sequences

XP_004841047.1 Protein

Lsm14b PREDICTED: protein LSM14 homolog B isoform X3 [Heterocephalus glaber]

Length: 385 aa     
>XP_004841047.1
MSGSSGTPYLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRPAPPREEIYEYIIFRGSDIKDITVCEPPKAQHTLPQDPAIVQSSLGSASASPFQPHVPYSPFRGMPPYGQLAASSLLSQQYASSLGLGAGFPSAPVGKSPMVEQAVQTGSVDNLNAKKLLPGKGTSGMQLSGRQAHPSSKTTGDIVQPAAVHTQGQVNDENRRPQRRRSGNRRTRNRSRGQNRPTNVKENTIKFEGDFDFESANAQFNREELDKEFKKKLNFKEDKAEKGEEKDQAVVTPSDETPAEEDLLGPNCYYDKSKSFFDNISSELKTSSRRTTWAEERKLNTETFGVSGRFLRGRTSRGGFRGGRGNGTTRRNPTSHRAGTGRV