Details from NCBI annotation

Gene Symbol Sycp2
Gene Name synaptonemal complex protein 2
Entrez Gene ID 101723898

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYCP2 ENSCPOG00000009549 (Guinea pig)

Gene Details

synaptonemal complex protein 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008571, Guinea pig)

Protein Percentage 82.11%
CDS Percentage 88.65%
Ka/Ks Ratio 0.38612 (Ka = 0.0989, Ks = 0.2561)

SYCP2 ENSG00000196074 (Human)

Gene Details

synaptonemal complex protein 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000350162, Human)

Protein Percentage 75.99%
CDS Percentage 85.98%
Ka/Ks Ratio 0.41691 (Ka = 0.1312, Ks = 0.3146)

Sycp2 ENSMUSG00000060445 (Mouse)

Gene Details

synaptonemal complex protein 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000079909, Mouse)

Protein Percentage 64.5%
CDS Percentage 78.1%
Ka/Ks Ratio 0.39705 (Ka = 0.2245, Ks = 0.5654)

Sycp2 ENSRNOG00000004529 (Rat)

Gene Details

synaptonemal complex protein 2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006038, Rat)

Protein Percentage 64.19%
CDS Percentage 77.4%
Ka/Ks Ratio 0.38844 (Ka = 0.2323, Ks = 0.5981)

Genome Location

Sequence Coding sequence

Length: 4539 bp    Location: 26188589..26122282   Strand: -
>XM_004840979.1
ATGCCAATAAAACCAGATCTCCAGCAGTTGGAAAAATGCATTGATGATGCATTAAGGAAAAATGATTTCAAGGCTTTGAAAACACTTTTACAAATTGATATTTGTGAAGATGTGACGATTAGATGCAGCAAACAGTTTTTCCACAAGTTGGATGACCTTATGTCCAGGGAACTTAATAAAAAGGATATTCAGACTATTTCAATCATTTTGGTTTCTATTGGAAAATGCGGCAAAAATATCAGCATATTAGGACAACCTGGACTTCCTACCATGATAAAACAAGGACTAGTCCAAAAGATGGTTGTATGGTTTGAAAAATCCAAGGAGATTATTCTAAGTCAAGGAAATTCAAAAGACGGCGCTGTTATAAATATGATAGAAGACTTATTTGATCTTTTTATGGTCATACATGACGTCAGTGATGAAGGTAAAAGGCAAATAGTGAAAAATTTCATACCTCGAATTTGTGCCTTGGTTATTGATTCAAGAGTGAATATTTGTTTTCAGCAGGAGACTTTAAAAAAAATGAATGCTATGCTTGAAAACATGTCTCAAGATGCCAGGAAAATACTTTCTAACCAAGAAATGTTAACTCTCATGAGTAGTATGGGAGAAAGGATTTTAGATGCTGGAGATTATGACTTGCAGGTAGGCATTGTGGAAGCTTTATGTAGAATGACCACAGAAAAACAAAGACAACAACTGGCACATCAGTGGTTTTCAATGGATTTTATTGCTAATGCATTTAAAGAAATTAAAGACTGTGAATTTGAAACAGATTGCAGGATATTTCTCAACCTTGTAAATGGCATGCTTGGAGATATGAGAAGGGTCTTTACATTTCCTTGTTTGTCAGCATTTCTTGATAAATATGAGCTGCAAATACCATCGGATGAAAAACTTGAAGACTTTTGGATTGATTTTAATCTTGGGAGCCAGACTCTGTCATTCTACATTGCTGGAGATGATGATCATCAATGGGAAGCAGTCACTGTGCCTGAGGAAAAAGTACAAATGTACAGTGTTGAAGTGAGAGAATCAAAGAAGCTACTGACTATAATTCTGAAAAATATAGTAAAAATTAGTAAAAGAGAAGGGAAAGAACTGCTTTTGTATTTTGACACATCATTAGAAATCACTAATGTGGTTGAAAAAATTTTTGGTGCCAGTAAATATAGGGAATTTTCAAGAAAACAAGGTGTTTCCGTTGCCAAAACATCTGTGCATGTACTTTTTGATGCAAGTGGATCACAGATTCTCGTGCCAGAAAGTCAGTTCTCAAACGTTGAAGAAGAACTCATTAGTTTAAAAGAAAAATCTCACCCCCCAGAGGAATTTGCTAACCCTCCAAAATGTATCCGTAACCGAGGGGACAGAAAAAATTGTCAGCCCGAGATAAATACTCCTAGCAAAAGAAAAATGTCTGAAGCATCAATGATTGTTCCTGGTGCAGATAGATACACTGTGAGAAGTCCAGTACTTTTAATCAACACATCAACTCAACGAAGAAGAATTAAACCACCACTCCAAATGATGAGTTCTGCAGAAAAAGTTGATATTTCTAAAACATTAGAAAATGGAATGGATAATGCTGTATCATGTAAATCTAGACCATCTGAAGAAAGAAGCAGAAGAGCTAATACAGATAAACATAACAAAACTGCTAAAGTTGTAGAAGAGACACAAAATAAGGACATTGGATTCCAAAACCAAAATTTAAATGAACTCCAGGATTTTGGTCCTGATACAAAAGCAGAGGGAGAAATAGATAAGCCTGGATTTCCTTGTGTTTTAGACAATAACTGTGAAAATAAAATCCACTCCAAATGGGCTTGTTGGACACCTGTGTCAACTATTAAACTGTGTAATAACCAAAGAACCAGTACTTCATCAGGAGACACATTTAATCAAGGTATTGGTATCAATAAAAAACATACTAAACAAAAATCATCCTCTTCAATATCAGATTATGATTCTGAAGAAACAGGAAAGGGAAAATATAAGAAAGAAATAGTGGAACGTAACAAAATAGATAAATCGGAAGTTTGCAAAAGAAACAGTCAACAACAAAATCATCCTAAATATTCAGTGCAGAAAAATACTGAAAATACCAAGCAGAGTGATTGGCATGTTGAATCTGAAACTACTTTTAAATCAGTTCTCCTAAATAAGACAGTTGAAGAATCTCTGATCTATAGTAAGAAATACATATTGTCAAAAGATATGAATGCTGCTATTTGTGATAGAAGCCCTTCTAGAAAAAATATGAGAAGTCAGAGAAAATCAGAGGGAGAAGTGACTTCTGAACTTGATTCCTCAGATTTGAAACAAAAAATGAGAGAGAAGTCAAAAGGGAAGGGGTTTACTGATGCAGCAGAATCCTTGATAAACCAAATTAATAAGAGATACAAACCAAAAGATGACATAAAGCCAACGAGAAAATTGAAGGAGTCTTCGATTGACAGTGTTTTTTTAAACAAGTCTGACCTACAACTCAGTAAGGAAAAAATTCAGAAAAAAAGTTACAGAAAGCTGAAGACTACTTTGGGTAATGTTACTTCTGAATGCCCATTGAATGATGTCTACAATTTTAATTTGAGTGGAGCTGATGAGCCTATTATAAAACTTGGAATCCAAGAATTTCAAGAAACAGCTAGAGAACCCTGCATGGATAATTCAGTGAAACTGGTAGATTTAAGGAATCATGATGAACTTGAACCACCTTTCAAAAGGAAAGATAAAAGGATTATAGCAAATCAGAAAAAGAAGATCTTTAGTGATACCGAGACGGAATATAAATGTGATGACAGCAAGACTGATGTTAGCTGGCTAAGAGAAACAAAGTCGAAACCACAGCTGATTGACTATAGCAGAAATAAAAATGTGAAGAAATATAAAAGTAGGAGATCAAGACCATCTTTGGATAAGGGACAACCAAGATCTAAAATGGCACCCAGTAAAAACATCATCAAAAAGGTAGATGAGACTGTTCCAGATGGGAGAACCAGACTCCCACGAAGAGCAACAAGAACCAAAAAAAATTATAAAGATCTCTCAAATTCAGAATCTGAGAGTGAGCAAGAATCTGCACATTCATTTAAAGAAAAATTGCTAGTAAAGGAGGAGAACCACTCCAGAACCAAAAACATGAAACTACCAAAGAAACAACAGAAAGTCATCTTGGCTGAAACACAAAAAGAACTATCAAAAATCCAGAAAAATTCATCACTACTAAAAGATACTATAAATGATAATAACCTTGACTTATCTCCTGTATCTTTAGCTGGGAGTCCATCATCTATAGAAGTAATGAGATGTGTGGACAAAATAACAGAAAATGATTCTACTCAGGAGTATGACTGCATAACAAAGTCTCTATCCCCTTATCCAAAAACTTCATCACCCAGATCTTTAAACAGTGACAGTAGAGTTAGAGGTCCAGTAAACTCACCCAGAAACAATGGGACGAACTTAATATGTGCAAGTGTAAGTTGCTCACCAATTCCACCACCTCTGCTTTTGCCCAGTCATACTCCAAGAAAGAATAATACTGTTGTGAATAAAGAAAACATAAATTCTGTGGTACTTACACAAGAAACGCAAAATTGTAACAGCTATTCAGATATAAGCAGTTATACCTCAGAAAAACAGTTTATGGAAATTGAATCTCCAAGTATCAATGAAAATCATATGGAAAGCAAAAGAGAGGAAAGCCATTTAGCATCTTCATTATCCATGTCCAGTGAAGGAAGAGAGAAAATACACTTTGGCATGACTCATGACACTACTCAGATATCAGGCCTCACTCAACATCTTAGTTGCAAACGAATGTATATAGAAGATAATCTAAGTAATTCCAATGAAGTGAAAGTGGAAGAACTAAGGAGCATACACTTGCTTCCCAAAAGACTCTGTAAAACTGAAGATACAGATCATCACACCCGCAAAATGTTTGAAAGTTTATCTCCATTATCAACAAATGATTGTTTTATTCCTGAGAACTGGAAAAATAACCTTCCAGGTGTAGGCATGATTTGTGAGAAGCTTAATTCCCAGTTTAAAAGGAAGATTCATATCCGACATAAAATGACAGATTACTTTACTAAGCAGTCTTGGACAACAGTTCAACAGCATGTGAAAACAATGAACCATCAAATTCAGGAGTATAGGATTAAAAAACTTGATAAATTCCAGATGAACATCATAGAAGAGCTGGAGAATTTTGAAAAAGATTCACAATCTTTAAAAGATTTGGAGAAGGAATTTGTGGACTTTTGGGAAAAGATACATCAGCAGTTCAGAGAATATCAGAGAAGTGAAGGGCAGAGGCTTCATCTTTTGAAAACTTCATTGGATAAAAATGTCTTCTATAAATCTGATCATGAAGAAACTGTTTTTACATCAGAGGTGGGCTCGATGAAAGAAAATTTGAAAATGCTGCAAGAGAGGCTTCTTTTGGAAATGCAAGAAGAGGAACTTCTTAATGTACACAGAGGACTGATGTCATTATTCATGGCTCATGGTAGAAATGATGAGTGA

Related Sequences

XP_004841036.1 Protein

Sycp2 PREDICTED: synaptonemal complex protein 2 [Heterocephalus glaber]

Length: 1512 aa      View alignments
>XP_004841036.1
MPIKPDLQQLEKCIDDALRKNDFKALKTLLQIDICEDVTIRCSKQFFHKLDDLMSRELNKKDIQTISIILVSIGKCGKNISILGQPGLPTMIKQGLVQKMVVWFEKSKEIILSQGNSKDGAVINMIEDLFDLFMVIHDVSDEGKRQIVKNFIPRICALVIDSRVNICFQQETLKKMNAMLENMSQDARKILSNQEMLTLMSSMGERILDAGDYDLQVGIVEALCRMTTEKQRQQLAHQWFSMDFIANAFKEIKDCEFETDCRIFLNLVNGMLGDMRRVFTFPCLSAFLDKYELQIPSDEKLEDFWIDFNLGSQTLSFYIAGDDDHQWEAVTVPEEKVQMYSVEVRESKKLLTIILKNIVKISKREGKELLLYFDTSLEITNVVEKIFGASKYREFSRKQGVSVAKTSVHVLFDASGSQILVPESQFSNVEEELISLKEKSHPPEEFANPPKCIRNRGDRKNCQPEINTPSKRKMSEASMIVPGADRYTVRSPVLLINTSTQRRRIKPPLQMMSSAEKVDISKTLENGMDNAVSCKSRPSEERSRRANTDKHNKTAKVVEETQNKDIGFQNQNLNELQDFGPDTKAEGEIDKPGFPCVLDNNCENKIHSKWACWTPVSTIKLCNNQRTSTSSGDTFNQGIGINKKHTKQKSSSSISDYDSEETGKGKYKKEIVERNKIDKSEVCKRNSQQQNHPKYSVQKNTENTKQSDWHVESETTFKSVLLNKTVEESLIYSKKYILSKDMNAAICDRSPSRKNMRSQRKSEGEVTSELDSSDLKQKMREKSKGKGFTDAAESLINQINKRYKPKDDIKPTRKLKESSIDSVFLNKSDLQLSKEKIQKKSYRKLKTTLGNVTSECPLNDVYNFNLSGADEPIIKLGIQEFQETAREPCMDNSVKLVDLRNHDELEPPFKRKDKRIIANQKKKIFSDTETEYKCDDSKTDVSWLRETKSKPQLIDYSRNKNVKKYKSRRSRPSLDKGQPRSKMAPSKNIIKKVDETVPDGRTRLPRRATRTKKNYKDLSNSESESEQESAHSFKEKLLVKEENHSRTKNMKLPKKQQKVILAETQKELSKIQKNSSLLKDTINDNNLDLSPVSLAGSPSSIEVMRCVDKITENDSTQEYDCITKSLSPYPKTSSPRSLNSDSRVRGPVNSPRNNGTNLICASVSCSPIPPPLLLPSHTPRKNNTVVNKENINSVVLTQETQNCNSYSDISSYTSEKQFMEIESPSINENHMESKREESHLASSLSMSSEGREKIHFGMTHDTTQISGLTQHLSCKRMYIEDNLSNSNEVKVEELRSIHLLPKRLCKTEDTDHHTRKMFESLSPLSTNDCFIPENWKNNLPGVGMICEKLNSQFKRKIHIRHKMTDYFTKQSWTTVQQHVKTMNHQIQEYRIKKLDKFQMNIIEELENFEKDSQSLKDLEKEFVDFWEKIHQQFREYQRSEGQRLHLLKTSLDKNVFYKSDHEETVFTSEVGSMKENLKMLQERLLLEMQEEELLNVHRGLMSLFMAHGRNDE