Details from NCBI annotation

Gene Symbol Tubb1
Gene Name tubulin, beta 1 class VI
Entrez Gene ID 101720612

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TUBB1 ENSCPOG00000012388 (Guinea pig)

Gene Details

tubulin, beta 1 class VI

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011146, Guinea pig)

Protein Percentage 93.57%
CDS Percentage 90.69%
Ka/Ks Ratio 0.0645 (Ka = 0.0323, Ks = 0.5011)

TUBB1 ENSG00000101162 (Human)

Gene Details

tubulin, beta 1 class VI

External Links

Gene Match (Ensembl Protein ID: ENSP00000217133, Human)

Protein Percentage 91.8%
CDS Percentage 87.21%
Ka/Ks Ratio 0.06227 (Ka = 0.0453, Ks = 0.727)

Tubb1 ENSMUSG00000016255 (Mouse)

Gene Details

tubulin, beta 1 class VI

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000016399, Mouse)

Protein Percentage 90.69%
CDS Percentage 85.81%
Ka/Ks Ratio 0.06086 (Ka = 0.0491, Ks = 0.8075)

Tubb1 ENSRNOG00000046151 (Rat)

Gene Details

Protein LOC679312; RCG40913

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065711, Rat)

Protein Percentage 90.91%
CDS Percentage 85.66%
Ka/Ks Ratio 0.05872 (Ka = 0.0493, Ks = 0.8402)

Genome Location

Sequence Coding sequence

Length: 1359 bp    Location: 25311142..25318142   Strand: +
>XM_004840968.1
ATGCGGGAAATCGTGCACATTCAGATTGGCCAGTGTGGCAACCAGATCGGAGCTAAGTTCTGGGAGATGATCGGCGAGGAGCACAGCATCGACTGCATGGGGAATGAGCACGGGGCCTCCGCCCTGCAGCTGGAGCGAGTCAGCGTGTATTACAACGAAGCCTACGGTAAAAAGTATGTGCCCCGAGCCGTGCTGGTGGACCTAGAGCCTGGGACAATGGACAGCATCCGGTCCAGCAAGTTGGGAGCCCTCTTCCAACCCGACAGTTTTGTCCATGGTAACTCTGGGGCTGGCAACAACTGGGCAAAGGGCCATTACACTGAGGGCGCTGAGCTGATAGAAACTGTCATGGACGTGGTGAGGAGTGAGAGTGAGAACTGCGACTGCCTGCAAGGCTTCCAGATTGTCCACTCCCTGGGCGGGGGCACAGGCTCAGGCATGGGCACTCTGCTCATGAACAAGATCAGAGAGGAGTACCCCGACCGCATCCTCAACTCCTTCAGCGTCATGCCTTCGCCCAAGGTGTCCGACACGGTGGTGGAGCCCTACAATGCTGTGCTGTCCATCCACCAGCTGATTGAGAACACAGACGCCTGCTTCTGCATCGACAATGAGGCGCTCTACGACATCTGTTTCCGAACCCTGAAGCTGACGACGCCCACCTACAGGGATCTCAACCACCTGGTGTCCTTAACCATGAGCGGCATCACCACCTCGCTGCGATTCCCTGGCCAGCTCAACGCAGACCTGCGCAAGCTGGCGGTGAACATGGTGCCCTTCCCTCGCCTGCACTTCTTCATGCCTGGCTTTGCTCCACTCACAGCCCAGGGCAGCCAGCAGTACCGCGCCCTCTCTGTGGCTGAGCTCACCCAGCAGATGTTTGATGCCCGCAACACCATGGCTGCCTGTGACCCACGCCGCGGCCGTTATCTGACTGTGGCCTGCATCTTCCGGGGGAAGATGTCCACCAAAGAAGTGGATCAACAGTTGCTGTCTGTGCAGAGGAGGAACAGCAGCTGCTTTGTGGAGTGGATTCCTCACAATGTCAAGGTGGCTGTGTGTGACATCCCACCCCGCGGGCTGAACATGGCGGCCACCTTCATAGGCAACAACACAGCCATCCAAGAGCTCTTCAGCAGGGTTTCTGAGCACTTCTCAGCCATGTTCAAAAGGAGAGCTTTTGTCCACTGGTACACCAGCGAAGGGATGGACGTAAGTGAATTCGGGGAAGCCGAAAGGAACATCCATGATTTGGTGTCTGAGTATCAACAATTTCAAGATGCCAAAGCGGTTCTGGAGGAAAACGAAGAGGTCGTGGAGGAGGTGGATATGGGAGAAGATAAGGAGCCTGAGCCGTGA

Related Sequences

XP_004841025.1 Protein

Tubb1 PREDICTED: tubulin beta-1 chain [Heterocephalus glaber]

Length: 452 aa      View alignments
>XP_004841025.1
MREIVHIQIGQCGNQIGAKFWEMIGEEHSIDCMGNEHGASALQLERVSVYYNEAYGKKYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIETVMDVVRSESENCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRILNSFSVMPSPKVSDTVVEPYNAVLSIHQLIENTDACFCIDNEALYDICFRTLKLTTPTYRDLNHLVSLTMSGITTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTMAACDPRRGRYLTVACIFRGKMSTKEVDQQLLSVQRRNSSCFVEWIPHNVKVAVCDIPPRGLNMAATFIGNNTAIQELFSRVSEHFSAMFKRRAFVHWYTSEGMDVSEFGEAERNIHDLVSEYQQFQDAKAVLEENEEVVEEVDMGEDKEPEP