Details from NCBI annotation

Gene Symbol Stx16
Gene Name syntaxin 16, transcript variant X3
Entrez Gene ID 101712808

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

STX16-NPEPL1 ENSCPOG00000027307 (Guinea pig)

Gene Details

STX16-NPEPL1 readthrough (NMD candidate)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019754, Guinea pig)

Protein Percentage 90.18%
CDS Percentage 89.57%
Ka/Ks Ratio 0.21512 (Ka = 0.0626, Ks = 0.2909)

STX16-NPEPL1 ENSG00000254995 (Human)

Gene Details

STX16-NPEPL1 readthrough (NMD candidate)

External Links

Gene Match (Ensembl Protein ID: ENSP00000457522, Human)

Protein Percentage 87.38%
CDS Percentage 84.0%
Ka/Ks Ratio 0.19263 (Ka = 0.099, Ks = 0.5141)

Stx16 ENSMUSG00000027522 (Mouse)

Gene Details

syntaxin 16

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000085218, Mouse)

Protein Percentage 93.56%
CDS Percentage 89.37%
Ka/Ks Ratio 0.07711 (Ka = 0.0324, Ks = 0.4203)

Genome Location

Sequence Coding sequence

Length: 981 bp    Location: 24951986..24977417   Strand: +
>XM_004840943.1
ATGGCCACCAGGCGTTTAACCGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACACCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGGACGAGCTTGCCGATGACCGTATGGCACTGGTATCGGGCATTAGCTTAGATCCAGAAGCAGCCATCGGTGTAACAAAACGGTCACCTCCAAAATGGGTGGATGGAGTGGATGAAATACAATATGATGTTGGCCGGATTAAACAGAAGATGAAGGAGTTAGCCAGCCTTCACGACAAGCATTTAAACAGACCCACCCTGGATGACAGCAGTGAGGAGGAGCATGCCATTGAAATAACCACTCAGGAGGTCACACAGCTCTTCCACAGGTGTCAGCGTGCAGTGCAGGCCCTGCCGAGCAGGGCCCGGAGGGCCTGCTCCGAGCAGGAGGAGCGACTGCTGCGCAACGTGGTGGCCTCCCTGGCACAGACCCTGCAGGAGCTGTCCACCAGCTTCCGGCACGCACAATCCGGCTACCTCAAGCGCGTGAAGAATCGAGAGGAAAGATCCCAGCATTTTTTTGATACATCAGTACCACTAATGGATGATGGAGACGATAATACTCTGTATGCTCGGGGCTTCACGGATGACCAGCTGGTGTTGGTGGAGCAGAATACACTGATGGTGGAGGAGAGAGCGCGCGAGATCCTCCAGATTGCGCAGTCCATTTCTGACCTGAATGAAATCTTTAGGGACTTAGGAGCCATGATTGTAGAGCAGGGAACGGTCCTTGATAGAATTGACTATAACGTTGAACAGTCCTGTATCAAAACTGAAGATGGCTTGAAACAGCTTCACAAGGCAGAGCAGTACCAAAAGAAGAATCGGAAGATGCTTGTGATTTTAATGCTGTTTGTCATCATCATTATCCTCATTGTTGTCCTTGTCGGTGTGAAGTCTCGCTAG

Related Sequences

XP_004841000.1 Protein

Stx16 PREDICTED: syntaxin-16 isoform X3 [Heterocephalus glaber]

Length: 326 aa      View alignments
>XP_004841000.1
MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHTTSSPLHSRSIAAELDELADDRMALVSGISLDPEAAIGVTKRSPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEVTQLFHRCQRAVQALPSRARRACSEQEERLLRNVVASLAQTLQELSTSFRHAQSGYLKRVKNREERSQHFFDTSVPLMDDGDDNTLYARGFTDDQLVLVEQNTLMVEERAREILQIAQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNRKMLVILMLFVIIIILIVVLVGVKSR