Details from NCBI annotation

Gene Symbol Crnkl1
Gene Name crooked neck pre-mRNA splicing factor-like 1 (Drosophila), transcript variant X1
Entrez Gene ID 101724733

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CRNKL1 ENSCPOG00000004418 (Guinea pig)

Gene Details

crooked neck pre-mRNA splicing factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003987, Guinea pig)

Protein Percentage 97.82%
CDS Percentage 92.29%
Ka/Ks Ratio 0.03623 (Ka = 0.0123, Ks = 0.3395)

CRNKL1 ENSG00000101343 (Human)

Gene Details

crooked neck pre-mRNA splicing factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000366557, Human)

Protein Percentage 95.63%
CDS Percentage 89.76%
Ka/Ks Ratio 0.04571 (Ka = 0.0229, Ks = 0.5011)

Crnkl1 ENSRNOG00000010587 (Rat)

Gene Details

crooked neck pre-mRNA splicing factor-like 1 (Drosophila) (Crnkl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014632, Rat)

Protein Percentage 96.67%
CDS Percentage 87.83%
Ka/Ks Ratio 0.02728 (Ka = 0.0192, Ks = 0.7053)

Genome Location

Sequence Coding sequence

Length: 2118 bp    Location: 20581719..20563001   Strand: -
>XM_004840893.1
ATGGCGGCCTCCACAGCGGCCGGGAAGCAGCGAATTCCCAAGGTGGCCAAGGTAAAAAACAAAGCCCCAGCTGAAGTACAGATAACTGCTGAACAACTCTTAAGAGAAGCCAAGGAAAGAGAACTTGAGCTTCTGCCACCTCCACCTCAGCAGAAGATCACAGATGAAGAAGAATTAAACGATTACAAGCTAAGGAAAAGGAAGACTTTTGAAGATAACATAAGAAAAAACAGGACTGTGATTAGTAACTGGATAAAGTACGCACAATGGGAAGAAAGTCTAAAGGAAATTCAAAGGGCTCGATCCATATACGAGCGTGCTTTAGATGTAGACTATCGAAATATCACACTGTGGCTGAAATATGCAGAAATGGAAATGAAGAACCGCCAAGTCAACCACGCCCGAAACATCTGGGACCGGGCCATAACAACTCTGCCGAGAGTCAACCAATTCTGGTACAAGTATACGTACATGGAGGAGATGCTGGGCAATGTGCCGGGAGCCCGGCAAGTGTTTGAGCGCTGGATGGAATGGCAGCCTGAGGAGCAGGCCTGGCACTCCTACATCAACTTTGAGCTGAGGTACAAGGAGGTGGAGCGGGCCCGCACCATCTATGAGCGCTTTGTCCTTGTGCACCCTGATGTGAAAAACTGGATCAAGTACGCCCGCTTCGAAGAGAAACATGCTTACTTTGCCCATGCCCGGAAAGTATACGAGAGAGCGGTGGAATTCTTTGGAGATGAACACATGGATGAACACCTTTATGTTGCTTTTGCCAGATTTGAAGAAAATCAGAAAGAATTCGAAAGGGTGCGAGTCATCTACAAGTACGCTCTGGATAGAATCCCAAAACATGAGGCCCAAGAACTCTTTAAAAACTACACCATCTTTGAGAAGAAGTTCGGCGACAGGCGGGGCATTGAAGACATCATCGTGAGCAAGCGGAGGTTCCAGTATGAGGAGGAAGTGAAGGCTAATCCACACAATTACGATGCATGGTTCGATTACTTGCGCTTGGTGGAAAGTGACGCCGAAGCTGAGACTGTGCGTGAAGTCTATGAGAGAGCGATTGCCAACGTCCCGCCCATCCCAGAGAAGCGGCACTGGAAGCGCTACATCTACCTGTGGATCAACTATGCACTCTATGAGGAGCTGGAAGCAAAGGACCCTGAAAGGACAAGACAAGTTTATCGAGCCACTTTGGAACTAATTCCACACAAAAAGTTCACATTTGCCAAAATGTGGTTATATTATGCACAGTTTGAAATAAGACAGAAAAATTTACCATTTGCCAGACGAGCTTTGGGGACGGCCATAGGCAAATGTCCAAAGAACAAGTTATTTAAAGGTTACATAGAATTGGAGTTGCAGCTTCGAGAATTCGACAGATGCCGGAAGCTTTATGAAAAGTTCCTGGAATTTGGACCTGAAAATTGTACCTCCTGGATTAAGTTTGCCGAGTTAGAGACAATCCTTGGTGATATTGACAGAGCACGGGCCATCTATGAATTGGCTATCAGCCAGCCACGTCTAGACATGCCGGAGGTGCTTTGGAAATCATACATTGATTTTGAAATTGAGCAGGAAGAAACTGAAAGAACACGAAATCTTTACCGACAGCTGCTTCAGCGGACACAACATGTCAAGGTATGGATCAGTTTTGCTCAGTTTGAATTGTCTTCCGGGAAAGAAGGAAGCATCACCAAATGCAGACAAATCTATGAAGAAGCTAACAAAACCATGCGGAACTGTGAAGAAAAGGAAGAGAGGCTTATGCTGCTGGAATCCTGGCGAAGCTTTGAAGATGAATTTGGAACCGCATCAGATAAAGAGAGAGTGGACAAACTAATGCCAGAGAAAGTCAAAAAGAGACGAAAAGTTCAGGCGGATGATGGGTCTGACGCAGGCTGGGAAGAATACTATGATTACATCTTTCCTGAGGATGCTGCCAACCAGCCCAACCTCAAGCTGCTGGCCATGGCCAAACTCTGGAAGAAACAGCAGCAGGAAAAGGAGGCTGCTGAGCAGGATCCAGATAAGGACATCAATGAGAAGCTCCAAGATCATCCAATGAAAATAATAACGTACATAAACTACCCAGGACATCTATCTGCCTAA

Related Sequences

XP_004840950.1 Protein

Crnkl1 PREDICTED: crooked neck-like protein 1 isoform X1 [Heterocephalus glaber]

Length: 705 aa     
>XP_004840950.1
MAASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELNDYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVPGARQVFERWMEWQPEEQAWHSYINFELRYKEVERARTIYERFVLVHPDVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFARFEENQKEFERVRVIYKYALDRIPKHEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVREVYERAIANVPPIPEKRHWKRYIYLWINYALYEELEAKDPERTRQVYRATLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRALGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSITKCRQIYEEANKTMRNCEEKEERLMLLESWRSFEDEFGTASDKERVDKLMPEKVKKRRKVQADDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKLWKKQQQEKEAAEQDPDKDINEKLQDHPMKIITYINYPGHLSA