Details from NCBI annotation

Gene Symbol Otor
Gene Name otoraplin
Entrez Gene ID 101709683

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

OTOR ENSCPOG00000005013 (Guinea pig)

Gene Details

otoraplin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004513, Guinea pig)

Protein Percentage 91.41%
CDS Percentage 91.15%
Ka/Ks Ratio 0.21913 (Ka = 0.0513, Ks = 0.2339)

OTOR ENSG00000125879 (Human)

Gene Details

otoraplin

External Links

Gene Match (Ensembl Protein ID: ENSP00000246081, Human)

Protein Percentage 91.41%
CDS Percentage 90.1%
Ka/Ks Ratio 0.15729 (Ka = 0.0493, Ks = 0.3136)

Otor ENSMUSG00000027416 (Mouse)

Gene Details

otoraplin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028902, Mouse)

Protein Percentage 87.5%
CDS Percentage 86.46%
Ka/Ks Ratio 0.14461 (Ka = 0.0709, Ks = 0.49)

Otor ENSRNOG00000028721 (Rat)

Gene Details

otoraplin (Otor), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033828, Rat)

Protein Percentage 86.72%
CDS Percentage 85.16%
Ka/Ks Ratio 0.12717 (Ka = 0.0746, Ks = 0.5865)

Genome Location

Sequence Coding sequence

Length: 387 bp    Location: 17908579..17911354   Strand: +
>XM_004840849.1
ATGGCAAGAATATTGTTGCTTTTTCTCCCTGGTCTGGTGGCTGTATGTGCGGGGCATGGAGTATTTATGGATAGACTTGCTTCCAAGAAGCTGTGTGCGGATGACGAGTGTGTCTATACTATTTCTCTGGCTAGAGCCCAAGAAGATTATAATGCCCCAGACTGTAGATTCATTAATGTTAAAAAAGGGCAGCAGATCTACATTTACTCAAAGCTGGTAAAAGAAAATGAAGCTGGAGAATTTTGGGCTGGCAGTGTTTATGGTGATCACCAGACTGAGATGGGAATCGTGGGTTATTTCCCCAGCAGCTTGGTCAAGGAGCAACGTGTGTACCAGGAAGCCACCAAGGAAGTTCTCACTACAGATATTGACTTCTTCTGTGAATAA

Related Sequences

XP_004840906.1 Protein

Otor PREDICTED: otoraplin [Heterocephalus glaber]

Length: 128 aa      View alignments
>XP_004840906.1
MARILLLFLPGLVAVCAGHGVFMDRLASKKLCADDECVYTISLARAQEDYNAPDCRFINVKKGQQIYIYSKLVKENEAGEFWAGSVYGDHQTEMGIVGYFPSSLVKEQRVYQEATKEVLTTDIDFFCE