Details from NCBI annotation

Gene Symbol Ism1
Gene Name isthmin 1, angiogenesis inhibitor, transcript variant X2
Entrez Gene ID 101703200

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ISM1 ENSCPOG00000013442 (Guinea pig)

Gene Details

isthmin 1, angiogenesis inhibitor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012103, Guinea pig)

Protein Percentage 95.22%
CDS Percentage 93.06%
Ka/Ks Ratio 0.08467 (Ka = 0.0228, Ks = 0.2694)

ISM1 ENSG00000101230 (Human)

Gene Details

isthmin 1, angiogenesis inhibitor

External Links

Gene Match (Ensembl Protein ID: ENSP00000262487, Human)

Protein Percentage 92.89%
CDS Percentage 89.87%
Ka/Ks Ratio 0.06736 (Ka = 0.0325, Ks = 0.4818)

Ism1 ENSMUSG00000074766 (Mouse)

Gene Details

isthmin 1 homolog (zebrafish)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000096910, Mouse)

Protein Percentage 93.17%
CDS Percentage 87.3%
Ka/Ks Ratio 0.05626 (Ka = 0.0349, Ks = 0.6205)

Ism1 ENSRNOG00000042546 (Rat)

Gene Details

isthmin 1, angiogenesis inhibitor (Ism1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061619, Rat)

Protein Percentage 88.93%
CDS Percentage 86.27%
Ka/Ks Ratio 0.1186 (Ka = 0.0597, Ks = 0.5033)

Genome Location

Sequence Coding sequence

Length: 1395 bp    Location: 14186973..14262530   Strand: +
>XM_004840830.1
ATGGTGCGTCTGGCTGCCGAGCTGCTGCTGATCTTGGGGTTACTGCTGCTCACACTGCACATCACCGTTCTGCGCGGTTCCGGAGCCACCGACGGGCCAGACGCGGCCACCGGCAACGCCAGCCTGGCCCAGTTGCAGAATAACCTTAACCTGGAAGGTGACTCCACATCAGAAACCAGCTTTCCTCTCTCCAAAGAAGTACCAGGGGAGCCTCTGAACCACCACGCTACACATCAGCCCTTTTCCAGGCAGCAATTCCCAGAAGAAACTGGCCACCCCTCCTTGCAAAGAGATGGCCCCAGGTCCTTTCTCCTGGACTTGCCAAACTTTCCAGATCTTTCTAAAGCTGATATCAATGGGCAGAATCCAAATATCCAGGTCACCATAGAGGTGGTCGACGGTCCAGACTCTGAAGGAGATAAAGATCAGCATCCGGAGAATAAGCCCAGCTGGTCAGTCCCATCCCCTGACTGGCAGGCCTGGTGGCAGAGGTCCTTGTCCTTGGTGAGGGCCAACAGCGGGGACCAGGACTACAAGTACGACAGTACCTCAGATGACAGCAACTTCCTCAACCCCCCCAGGGGGTGGGATCGTCCGGCCCCAGGCCACCAGACTTTTGAAACCAAAGAGCAGCCAGAATATGATTCCACAGATGGAGAAGGTGACTGGAGTCTCTGGTCTGCCTGCAGCATCACCTGTGGGAATGGTAACCAGAAACGGACCCGGTCTTGTGGCTACGCGTGCACTGCAACCGAATCTAGGACCTGTGACCGTCCAAACTGCCCAGGCATTGAGGACACCTTCAGAACAGCGGCCACTGAAGTGAGTCTGCTTGCGGGAAGTGAGGAGTTTAATGCCACCAAGCTGTTTGAAGTTGATACAGACAGCTGTGAGCGATGGATGAGCTGCAGAAGCGAATTCCTAAAGAAGTATATGCACAAGGTGATCAATGACCTGCCCAGCTGTCCCTGCTCTTACCCCACCGAAGTGGCCTACAGCACAGCGGACATCTTTGACCACATAAAGCGCAAGGACTTCCGCTGGAAGGATGCCAGCGGGCCCAAAGAGAAGCTGGAGATCTACAAACCCACAGCCCGATACTGCATCCGGTCCATGCTGTCGCTAGAGAGCACCACGCTGGCTGCCCAGCATTGTTGCTATGGTGACAACATGCAGCTTATCACCCGGGGCAAAGGGGCGGGGACACCCAATCTCATCAGCACGGAGTTCTCTGCTGAACTGCACTACAAGGTGGATGTGCTGCCCTGGATCATCTGCAAGGGCGACTGGAGCAGATACAACGAGGCTCGGCCACCCAACAATGGGCAGAAGTGCACTGAGAGCCCCTCAGACGAGGACTACATCAAGCAGTTCCAGGAGGCCAGGGAGTACTGA

Related Sequences

XP_004840887.1 Protein

Ism1 PREDICTED: isthmin-1 isoform X2 [Heterocephalus glaber]

Length: 464 aa     
>XP_004840887.1
MVRLAAELLLILGLLLLTLHITVLRGSGATDGPDAATGNASLAQLQNNLNLEGDSTSETSFPLSKEVPGEPLNHHATHQPFSRQQFPEETGHPSLQRDGPRSFLLDLPNFPDLSKADINGQNPNIQVTIEVVDGPDSEGDKDQHPENKPSWSVPSPDWQAWWQRSLSLVRANSGDQDYKYDSTSDDSNFLNPPRGWDRPAPGHQTFETKEQPEYDSTDGEGDWSLWSACSITCGNGNQKRTRSCGYACTATESRTCDRPNCPGIEDTFRTAATEVSLLAGSEEFNATKLFEVDTDSCERWMSCRSEFLKKYMHKVINDLPSCPCSYPTEVAYSTADIFDHIKRKDFRWKDASGPKEKLEIYKPTARYCIRSMLSLESTTLAAQHCCYGDNMQLITRGKGAGTPNLISTEFSAELHYKVDVLPWIICKGDWSRYNEARPPNNGQKCTESPSDEDYIKQFQEAREY