Details from NCBI annotation

Gene Symbol Lamp5
Gene Name lysosomal-associated membrane protein family, member 5
Entrez Gene ID 101696819

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LAMP5 ENSCPOG00000007382 (Guinea pig)

Gene Details

lysosomal-associated membrane protein family, member 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006657, Guinea pig)

Protein Percentage 93.93%
CDS Percentage 92.5%
Ka/Ks Ratio 0.13693 (Ka = 0.0315, Ks = 0.2301)

LAMP5 ENSG00000125869 (Human)

Gene Details

lysosomal-associated membrane protein family, member 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000246070, Human)

Protein Percentage 92.86%
CDS Percentage 90.12%
Ka/Ks Ratio 0.1057 (Ka = 0.0373, Ks = 0.3525)

Lamp5 ENSMUSG00000027270 (Mouse)

Gene Details

lysosomal-associated membrane protein family, member 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000061180, Mouse)

Protein Percentage 86.07%
CDS Percentage 85.24%
Ka/Ks Ratio 0.16576 (Ka = 0.0816, Ks = 0.4921)

Lamp5 ENSRNOG00000005457 (Rat)

Gene Details

lysosomal-associated membrane protein family, member 5 (Lamp5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007274, Rat)

Protein Percentage 91.43%
CDS Percentage 87.26%
Ka/Ks Ratio 0.08893 (Ka = 0.0453, Ks = 0.5094)

Genome Location

Sequence Coding sequence

Length: 843 bp    Location: 10449399..10468950   Strand: +
>XM_004840814.1
ATGGATCTCCGAGGAAAAGCCTTTCCCCATGTCCGCAGATTTCGAGTTCTCCTCGTGCTGTTCAACACAATGGCTCAAATCATGGCAGAACAAGAAGTGGAAAATCTATCAGGCCTTTCCACTAACCCTGAAAAAGATATATTTGTGGTGCGGGAAAACGGGACGACGTGTCTCATGGCAGAGTTTGCAGCCAAATTTATTGTACCTTATGATGTGTGGGCCAGCAATTACGTCGATCTGATCACAGAACAGGCTGAGATCGCGCTGACCCGGGGAGCCGAGGTGAAGGGCCATTGTGGCCACAATGAGTCGGAGCTGCAGGTGTTCTGGGTGGATCGCGCCTACGCACTCAAAATGCTCTTTGTAAAGGAAAGCCACAACATATCCAAGGGACCCGAGGCCACGTGGAGGCTGAGCAAGGTGCAGTTTGTTTACGACTCCTCTGAGAAGACTCACTTTAAAGATGCAGTCAGTGCTGGGAAGCACACCGCCAACTCCCATCGCCTCTCTGCATTGGTGACCCCAGCTGGGAAGTCCTATGAATGTCAAGCTCAGCAAACCATCTCTCTGGCCTCCAGCGATCCCCAGAAGACTGTCACTATGATCCTGTCTGCGGTCCACATTCAACCCTTTGACATTATCTCAGATTTTGTCTTCAGCGAAGAGCATAAATGCCCAGTGGATGAGCGGGAGCAGTTGGAGGAAACCTTGCCCCTGATTTTGGGGCTGATCTTGGGCCTTATTATTGTGGTAACACTAGTGATTTACCACATCCACCACAAAATGACTGCCAACCAGGTTCAGATTCCTAGGGACCGATCCCAGTACAAACACATGGGCTAG

Related Sequences

XP_004840871.1 Protein

Lamp5 PREDICTED: lysosome-associated membrane glycoprotein 5 [Heterocephalus glaber]

Length: 280 aa      View alignments
>XP_004840871.1
MDLRGKAFPHVRRFRVLLVLFNTMAQIMAEQEVENLSGLSTNPEKDIFVVRENGTTCLMAEFAAKFIVPYDVWASNYVDLITEQAEIALTRGAEVKGHCGHNESELQVFWVDRAYALKMLFVKESHNISKGPEATWRLSKVQFVYDSSEKTHFKDAVSAGKHTANSHRLSALVTPAGKSYECQAQQTISLASSDPQKTVTMILSAVHIQPFDIISDFVFSEEHKCPVDEREQLEETLPLILGLILGLIIVVTLVIYHIHHKMTANQVQIPRDRSQYKHMG