Details from NCBI annotation

Gene Symbol Prnp
Gene Name prion protein, transcript variant X4
Entrez Gene ID 101710391

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRNP ENSCPOG00000015359 (Guinea pig)

Gene Details

Major prion protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013845, Guinea pig)

Protein Percentage 95.49%
CDS Percentage 92.35%
Ka/Ks Ratio 0.06058 (Ka = 0.0219, Ks = 0.3607)

PRNP ENSG00000171867 (Human)

Gene Details

prion protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000368752, Human)

Protein Percentage 87.6%
CDS Percentage 87.19%
Ka/Ks Ratio 0.13661 (Ka = 0.069, Ks = 0.5048)

Prnp ENSMUSG00000079037 (Mouse)

Gene Details

prion protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000088833, Mouse)

Protein Percentage 86.01%
CDS Percentage 84.22%
Ka/Ks Ratio 0.09327 (Ka = 0.0763, Ks = 0.8186)

Prnp ENSRNOG00000021259 (Rat)

Gene Details

prion protein (Prnp), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028881, Rat)

Protein Percentage 85.6%
CDS Percentage 85.05%
Ka/Ks Ratio 0.11792 (Ka = 0.0772, Ks = 0.6544)

Genome Location

Sequence Coding sequence

Length: 735 bp    Location: 5785180..5802162   Strand: +
>XM_004840771.1
ATGGTGAACGCTGGCTGCTGGCTACTGGTTCTTTTTGTGGCTACATGGAGTGACATTGGCCTCTGCAAGAAGCGACCAAAACCAGGAGGAGGATGGAACAGCGGGGGCAGCCGTTACCCATCTCACAGCGGGGGCAACTGGGGCCAGCCCCATGGCGGTGGCTGGGGACAGCCCCATGGTGGTAGTTGGGGCCAGCCCCATGGTGGAGGCTGGGGACAGCCCCATGGTGGTGGCTGGGGTCATGGAGGTGGCACCTACAATCAGTGGAACAAACCCAGTAAGCCCAAAACCAACATGAAGCATATGGCAGGCGCTGCAGCGGCGGGGGCAGTGGTGGGAGGTCTGACTGGCTACATGCTGGGGAGTGCCATGAGCAGGCCCCTCATCCATTTCGGCAGTGATTATGAGGACCGTTACTACCGTGAGAACATGTACCGTTACCCCAACCAAGTGTACTACAGGCCCGTGGATCAGTACAACAACCAGAACAGCTTTGTGCAGGACTGCGTCAATATCACGATCAAGCAGCACACAGTCACCACCACCACCAAAGGGGAGAACTTCACCGAGACCGACGTGAAGATAATGGAGCGCGTACTGGAGCAGATGTGCACCACGCAGTACCAGAAGGAGTCCCAGGCCTACTACTACCGCGGAAGAGCCGGCTTGGTGCTCTTCTCCTCCCCACCTGTGATCCTCCTCATCTCCTTCCTCATCTTCCTGATAGTGGGATGA

Related Sequences

XP_004840828.1 Protein

Prnp PREDICTED: major prion protein isoform X4 [Heterocephalus glaber]

Length: 244 aa      View alignments
>XP_004840828.1
MVNAGCWLLVLFVATWSDIGLCKKRPKPGGGWNSGGSRYPSHSGGNWGQPHGGGWGQPHGGSWGQPHGGGWGQPHGGGWGHGGGTYNQWNKPSKPKTNMKHMAGAAAAGAVVGGLTGYMLGSAMSRPLIHFGSDYEDRYYRENMYRYPNQVYYRPVDQYNNQNSFVQDCVNITIKQHTVTTTTKGENFTETDVKIMERVLEQMCTTQYQKESQAYYYRGRAGLVLFSSPPVILLISFLIFLIVG